RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 TMX2Q9Y320 296 aa12.24□□□□□ -0.45
USP13-205ENST00000497380 USP17L10C9JJH3 530 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 PDIA3P30101 505 aaKnown RBP12.23□□□□□ -0.45
USP13-205ENST00000497380 GUCY1A2P33402 732 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 GNAQP50148 359 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 PPATQ06203 517 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 COL9A3Q14050 684 aaPredicted RBP12.23□□□□□ -0.45
USP13-205ENST00000497380 ZNF654Q8IZM8 581 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 FEZ1Q99689 392 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
USP13-205ENST00000497380 ZHX2Q9Y6X8 837 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
USP13-205ENST00000497380 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 GOLGA8BA8MQT2 603 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 UBE2Q2LH0YL09 131 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 HSP90AA1P07900 732 aaKnown RBP12.22□□□□□ -0.45
USP13-205ENST00000497380 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP13-205ENST00000497380 JAG1P78504 1218 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 GPATCH4Q5T3I0 446 aaKnown RBP12.22□□□□□ -0.45
USP13-205ENST00000497380 NOL8Q76FK4 1167 aaKnown RBP12.22□□□□□ -0.45
USP13-205ENST00000497380 GMCL1P1Q8NEA9 526 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 LPAR1Q92633 364 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 TPCN1Q9ULQ1 816 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 SNCAIPQ9Y6H5 919 aa12.22□□□□□ -0.45
USP13-205ENST00000497380 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.45
USP13-205ENST00000497380 DOCK1Q14185 1865 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 SPDYE5A6NIY4 337 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 GOLGA8AA7E2F4 631 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 F5H6K3 240 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 CXCL11O14625 94 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 CPLX1O14810 134 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 PFKFB2O60825 505 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 CDKL5O76039 1030 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 BACE1P56817 501 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 KLRC3Q07444 240 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 TROAPQ12815 778 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 SPP2Q13103 211 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 ME3Q16798 604 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 ASPRV1Q53RT3 343 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 CST9Q5W186 159 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 MICU3Q86XE3 530 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
USP13-205ENST00000497380 FANCBQ8NB91 859 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 DCAF4Q8WV16 495 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 TMX3Q96JJ7 454 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 VCPKMTQ9H867 229 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 ELP3Q9H9T3 547 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
USP13-205ENST00000497380 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
USP13-205ENST00000497380 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.21□□□□□ -0.45
USP13-205ENST00000497380 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.46
USP13-205ENST00000497380 TMEM88BA6NKF7 163 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 RAD21O60216 631 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
USP13-205ENST00000497380 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
USP13-205ENST00000497380 SLC1A4P43007 532 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 HUNKP57058 714 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 FMR1Q06787 632 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP13-205ENST00000497380 STK3Q13188 491 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 PPIL2Q13356 520 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 RTN1Q16799 776 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 SHROOM1Q2M3G4 852 aaPredicted RBP12.2□□□□□ -0.46
USP13-205ENST00000497380 SLFN13Q68D06 897 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 USP17L2Q6R6M4 530 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 SIAH1Q8IUQ4 282 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 GMCL1Q96IK5 515 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
USP13-205ENST00000497380 LLPHQ9BRT6 129 aaKnown RBP12.2□□□□□ -0.46
USP13-205ENST00000497380 TMOD4Q9NZQ9 345 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 ATAD5Q96QE3 1844 aa12.2□□□□□ -0.46
USP13-205ENST00000497380 NID2Q14112 1375 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 A0A1W2PRG0 241 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 ZBTB48P10074 688 aaPredicted RBP12.19□□□□□ -0.46
USP13-205ENST00000497380 PDHBP11177 359 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 BMP3P12645 472 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 SMARCA1P28370 1054 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 ECE1P42892 770 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
USP13-205ENST00000497380 GRM4Q14833 912 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 FASTKD5Q7L8L6 764 aaKnown RBP12.19□□□□□ -0.46
USP13-205ENST00000497380 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
USP13-205ENST00000497380 HHIPL1Q96JK4 782 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 C12orf42Q96LP6 360 aa12.19□□□□□ -0.46
USP13-205ENST00000497380 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms