RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	INSM1	Q01101	510 aa	Predicted RBP	6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	KRT76	Q01546	638 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	PTPN12	Q05209	780 aa	Known RBP	6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	TLR1	Q15399	786 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	LDLRAD1	Q5T700	205 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	TTLL5	Q6EMB2	1281 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	TMEM214	Q6NUQ4	689 aa	Known RBP	6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	RIPOR1	Q6ZS17	1223 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	SV2A	Q7L0J3	742 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	TDRD7	Q8NHU6	1098 aa	Known RBP	6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	CLMN	Q96JQ2	1002 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	FAM84B	Q96KN1	310 aa	Predicted RBP	6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	PRMT6	Q96LA8	375 aa	Predicted RBP	6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	TEPSIN	Q96N21	525 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	SRCIN1	Q9C0H9	1055 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	USP44	Q9H0E7	712 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	SERTAD1	Q9UHV2	236 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	LOC285556	D6RIA3	1793 aa		6.97	□□□□□ -1.29
UBE3C-208	ENST00000497368	ATRNL1	Q5VV63	1379 aa		6.96	□□□□□ -1.29
UBE3C-208	ENST00000497368	CLRN2	A0PK11	232 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	CA12	O43570	354 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	ATP9B	O43861	1147 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	LOR	P23490	312 aa	Predicted RBP	6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	RGS19	P49795	217 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	FKBP1B	P68106	108 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	IFIT5	Q13325	482 aa	Known RBP	6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	MAP3K11	Q16584	847 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	CFAP100	Q494V2	611 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	RNFT1	Q5M7Z0	435 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	USP17L2	Q6R6M4	530 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	SLC4A10	Q6U841	1118 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	ATG9A	Q7Z3C6	839 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	FBXO33	Q7Z6M2	555 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	C2orf69	Q8N8R5	385 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	MPHOSPH8	Q99549	860 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	COL25A1	Q9BXS0	654 aa	Predicted RBP	6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	CHMP4A	Q9BY43	222 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	TIMMDC1	Q9NPL8	285 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	CHMP3	Q9Y3E7	222 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	DYRK1B	Q9Y463	629 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368	PTPRC	P08575	1304 aa		6.96	□□□□□ -1.3
UBE3C-208	ENST00000497368		E9PSI1	815 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368		F8W031	263 aa	Predicted RBP	6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	TRPA1	O75762	1119 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	C4orf17	Q53FE4	359 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	GNAS	Q5JWF2	1037 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	LDHAL6A	Q6ZMR3	332 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	APOBEC3F	Q8IUX4	373 aa	Known RBP	6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	CNTNAP3B	Q96NU0	1288 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	CFHR5	Q9BXR6	569 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	CNTNAP3	Q9BZ76	1288 aa		6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	6.95	□□□□□ -1.3
UBE3C-208	ENST00000497368	PLIN1	O60240	522 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	LZTS3	O60299	673 aa	Predicted RBP	6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	TM4SF4	P48230	202 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	DGKZ	Q13574	1117 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	PRKG1	Q13976	671 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	UBE4A	Q14139	1066 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	DBN1	Q16643	649 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	ZNF804A	Q7Z570	1209 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	PLEKHM2	Q8IWE5	1019 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	RHBDD1	Q8TEB9	315 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	ZNF837	Q96EG3	531 aa	Predicted RBP	6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	WNK4	Q96J92	1243 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	CALR3	Q96L12	384 aa	Known RBP	6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	DEFB129	Q9H1M3	183 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	GPAM	Q9HCL2	828 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	CNNM1	Q9NRU3	951 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	KIAA1024	Q9UPX6	916 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	KIF16B	Q96L93	1317 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	PLXNB2	O15031	1838 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	PDE4DIP	Q5VU43	2346 aa		6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.94	□□□□□ -1.3
UBE3C-208	ENST00000497368	GPR25	O00155	361 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	USP2	O75604	605 aa	Predicted RBP	6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	PDE8B	O95263	885 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	TBC1D8	O95759	1140 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	KCNJ4	P48050	445 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	SMTN	P53814	917 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	CACNB3	P54284	484 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	CCDC57	Q2TAC2	916 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	ALDH1L2	Q3SY69	923 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	WDR44	Q5JSH3	913 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	MFSD14B	Q5SR56	506 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	TRIM22	Q8IYM9	498 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	ZSCAN1	Q8NBB4	408 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	ZNF384	Q8TF68	577 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	MEIS3	Q99687	375 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	PTPN18	Q99952	460 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	TDRD3	Q9H7E2	651 aa	Known RBP	6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	TFIP11	Q9UBB9	837 aa	Known RBP	6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	ZNF70	Q9UC06	446 aa	Predicted RBP	6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	ANGEL1	Q9UNK9	670 aa	Known RBP	6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	USP3	Q9Y6I4	520 aa		6.93	□□□□□ -1.3
UBE3C-208	ENST00000497368	MROH5	Q6ZUA9	1318 aa		6.93	□□□□□ -1.3

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