RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 ADCY9O60503 1353 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 BCL9O00512 1426 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 ATRNO75882 1429 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 FAM177BA6PVY3 158 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 ZBTB39O15060 712 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 STARD3NLO95772 234 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 UBTFL1P0CB47 393 aaPredicted RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 NEXNQ0ZGT2 675 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 ITPK1Q13572 414 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 SETDB1Q15047 1291 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 BEND3Q5T5X7 828 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 ZNF772Q68DY9 489 aaPredicted RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 KRT27Q7Z3Y8 459 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 NPM2Q86SE8 214 aaKnown RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 MRPL18Q9H0U6 180 aaKnown RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 CHMP4BQ9H444 224 aaKnown RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 AKTIPQ9H8T0 292 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 SRA1Q9HD15 236 aaKnown RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 C9orf78Q9NZ63 289 aaPredicted RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 TRIM33Q9UPN9 1127 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 LRRFIP2Q9Y608 721 aaKnown RBP5.93□□□□□ -1.46
CMSS1-209ENST00000497345 KDM2BQ8NHM5 1336 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 PALLDQ8WX93 1383 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 PLEKHG2Q9H7P9 1386 aa5.93□□□□□ -1.46
CMSS1-209ENST00000497345 SMARCA5O60264 1052 aaPredicted RBP5.92□□□□□ -1.46
CMSS1-209ENST00000497345 TRIM37O94972 964 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 ALX3O95076 343 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 GNAI2P04899 355 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 NBPF7P0C2Y1 421 aaPredicted RBP5.92□□□□□ -1.46
CMSS1-209ENST00000497345 CYP19A1P11511 503 aaPredicted RBP5.92□□□□□ -1.46
CMSS1-209ENST00000497345 GPTP24298 496 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 RXRBP28702 533 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 COL13A1Q5TAT6 717 aaPredicted RBP5.92□□□□□ -1.46
CMSS1-209ENST00000497345 ANKRD45Q5TZF3 282 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 TTC39BQ5VTQ0 682 aaPredicted RBP5.92□□□□□ -1.46
CMSS1-209ENST00000497345 KIF6Q6ZMV9 814 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 MAP4K3Q8IVH8 894 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 SIRT2Q8IXJ6 389 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 GPR152Q8TDT2 470 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 FBXO41Q8TF61 875 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 SMARCC1Q92922 1105 aaPredicted RBP5.92□□□□□ -1.46
CMSS1-209ENST00000497345 PBXIP1Q96AQ6 731 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 USP44Q9H0E7 712 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 MUC3BQ9H195 1237 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 ZBTB1Q9Y2K1 713 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 PPME1Q9Y570 386 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 PAPPAQ13219 1627 aa5.92□□□□□ -1.46
CMSS1-209ENST00000497345 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.91□□□□□ -1.46
CMSS1-209ENST00000497345 F8W735 103 aaPredicted RBP5.91□□□□□ -1.46
CMSS1-209ENST00000497345 IGKV5-2P06315 115 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 GNAI3P08754 354 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 CRKLP46109 303 aaKnown RBP5.91□□□□□ -1.46
CMSS1-209ENST00000497345 RBM6P78332 1123 aaKnown RBP5.91□□□□□ -1.46
CMSS1-209ENST00000497345 HYAL2Q12891 473 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 HLFQ16534 295 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 CEP85Q6P2H3 762 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 PRR23CQ6ZRP0 262 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 LINC00116Q8NCU8 138 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 PLBD2Q8NHP8 589 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 SUCLG2Q96I99 432 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 SPACA7Q96KW9 195 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 METTL22Q9BUU2 404 aaPredicted RBP5.91□□□□□ -1.46
CMSS1-209ENST00000497345 TEX13AQ9BXU3 409 aaPredicted RBP5.91□□□□□ -1.46
CMSS1-209ENST00000497345 LNPKQ9C0E8 428 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 CCDC87Q9NVE4 849 aa5.91□□□□□ -1.46
CMSS1-209ENST00000497345 CCNL1Q9UK58 526 aaPredicted RBP5.91□□□□□ -1.46
CMSS1-209ENST00000497345 LAMB4A4D0S4 1761 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 UBR2Q8IWV8 1755 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 A0A087WZG4 1122 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 PNMA6EA0A0J9YXQ4 647 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 HYAL3O43820 417 aaPredicted RBP5.9□□□□□ -1.46
CMSS1-209ENST00000497345 ALDH1L1O75891 902 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 SCNN1AP37088 669 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 OS9Q13438 667 aaPredicted RBP5.9□□□□□ -1.46
CMSS1-209ENST00000497345 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.46
CMSS1-209ENST00000497345 AAMPQ13685 434 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 LRP8Q14114 963 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 CEP135Q66GS9 1140 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 INTS5Q6P9B9 1019 aaKnown RBP5.9□□□□□ -1.46
CMSS1-209ENST00000497345 UBE3BQ7Z3V4 1068 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 LRP10Q7Z4F1 713 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 PPP1R42Q7Z4L9 355 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 NBPF11Q86T75 865 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 ANKRD44Q8N8A2 993 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 LINS1Q8NG48 757 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 CCDC97Q96F63 343 aaPredicted RBP5.9□□□□□ -1.46
CMSS1-209ENST00000497345 PSMG3-AS1Q96PY0 264 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 SERPINA10Q9UK55 444 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 EXOC6BQ9Y2D4 811 aa5.9□□□□□ -1.46
CMSS1-209ENST00000497345 THSD7AQ9UPZ6 1657 aa5.9□□□□□ -1.47
CMSS1-209ENST00000497345 BRWD3Q6RI45 1802 aa5.9□□□□□ -1.47
CMSS1-209ENST00000497345 CACNA1FO60840 1977 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 TJP1Q07157 1748 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 LINC01387J3KSC0 135 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 GRM8O00222 908 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
CMSS1-209ENST00000497345 SURF6O75683 361 aaKnown RBP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 SMNDC1O75940 238 aaKnown RBP eCLIP5.89□□□□□ -1.47
CMSS1-209ENST00000497345 ATP2B4P23634 1241 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms