RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 VWCEQ96DN2 955 aa8□□□□□ -1.13
SNX13-211ENST00000496855 FUT4P22083 530 aa7.99□□□□□ -1.13
SNX13-211ENST00000496855 IKZF1Q13422 519 aa7.99□□□□□ -1.13
SNX13-211ENST00000496855 PLCL1Q15111 1095 aa7.99□□□□□ -1.13
SNX13-211ENST00000496855 RBBP8NLQ8NC74 664 aaPredicted RBP7.99□□□□□ -1.13
SNX13-211ENST00000496855 ATP13A1Q9HD20 1204 aa7.99□□□□□ -1.13
SNX13-211ENST00000496855 INTS3Q68E01 1043 aaKnown RBP7.98□□□□□ -1.13
SNX13-211ENST00000496855 CCDC81Q6ZN84 652 aa7.98□□□□□ -1.13
SNX13-211ENST00000496855 UBE2FQ969M7 185 aa7.98□□□□□ -1.13
SNX13-211ENST00000496855 SLC9A7Q96T83 725 aa7.98□□□□□ -1.13
SNX13-211ENST00000496855 IGSF5Q9NSI5 407 aa7.98□□□□□ -1.13
SNX13-211ENST00000496855 ZSWIM5Q9P217 1185 aa7.98□□□□□ -1.13
SNX13-211ENST00000496855 ADGRE2Q9UHX3 823 aa7.98□□□□□ -1.13
SNX13-211ENST00000496855 RNF4P78317 190 aa7.97□□□□□ -1.13
SNX13-211ENST00000496855 SEC16BQ96JE7 1060 aa7.97□□□□□ -1.13
SNX13-211ENST00000496855 TM9SF2Q99805 663 aa7.97□□□□□ -1.13
SNX13-211ENST00000496855 GPR62Q9BZJ7 368 aa7.97□□□□□ -1.13
SNX13-211ENST00000496855 DUSP15Q9H1R2 295 aaPredicted RBP7.97□□□□□ -1.13
SNX13-211ENST00000496855 CLEC3AO75596 197 aa7.96□□□□□ -1.13
SNX13-211ENST00000496855 ACRP10323 421 aa7.96□□□□□ -1.13
SNX13-211ENST00000496855 SRFP11831 508 aa7.96□□□□□ -1.13
SNX13-211ENST00000496855 NASPP49321 788 aaPredicted RBP7.96□□□□□ -1.13
SNX13-211ENST00000496855 IRAK1P51617 712 aa7.96□□□□□ -1.13
SNX13-211ENST00000496855 ZP2Q05996 745 aa7.96□□□□□ -1.13
SNX13-211ENST00000496855 NBPF12Q5TAG4 269 aaPredicted RBP7.96□□□□□ -1.13
SNX13-211ENST00000496855 LSRQ86X29 649 aaPredicted RBP7.96□□□□□ -1.13
SNX13-211ENST00000496855 TAB3Q8N5C8 712 aaPredicted RBP7.96□□□□□ -1.13
SNX13-211ENST00000496855 CRBNQ96SW2 442 aa7.96□□□□□ -1.13
SNX13-211ENST00000496855 TRIT1Q9H3H1 467 aaKnown RBP7.96□□□□□ -1.13
SNX13-211ENST00000496855 LMCD1Q9NZU5 365 aa7.96□□□□□ -1.13
SNX13-211ENST00000496855 ZNF792Q3KQV3 632 aa7.95□□□□□ -1.14
SNX13-211ENST00000496855 CBLL1Q75N03 491 aa7.95□□□□□ -1.14
SNX13-211ENST00000496855 TMEM192Q8IY95 271 aa7.95□□□□□ -1.14
SNX13-211ENST00000496855 PI4K2BQ8TCG2 481 aa7.95□□□□□ -1.14
SNX13-211ENST00000496855 SLC6A18Q96N87 628 aa7.95□□□□□ -1.14
SNX13-211ENST00000496855 SRRTQ9BXP5 876 aaKnown RBP7.95□□□□□ -1.14
SNX13-211ENST00000496855 GPATCH2Q9NW75 528 aa7.95□□□□□ -1.14
SNX13-211ENST00000496855 EIF6P56537 245 aaKnown RBP7.94□□□□□ -1.14
SNX13-211ENST00000496855 SLC23A3Q6PIS1 610 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 MBNL3Q9NUK0 354 aaKnown RBP7.94□□□□□ -1.14
SNX13-211ENST00000496855 ADAMTS6Q9UKP5 1117 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 FAM86C2PA6NEL3 165 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 WASH4PA8MWX3 477 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 GUCY2CP25092 1073 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 GIPRP48546 466 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 TMPRSS7Q7RTY8 843 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 ZNF512BQ96KM6 892 aaPredicted RBP7.94□□□□□ -1.14
SNX13-211ENST00000496855 CARS2Q9HA77 564 aaKnown RBP7.94□□□□□ -1.14
SNX13-211ENST00000496855 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 PRDM7Q9NQW5 492 aa7.94□□□□□ -1.14
SNX13-211ENST00000496855 RNASE1P07998 156 aaKnown RBP7.93□□□□□ -1.14
SNX13-211ENST00000496855 ATF4P18848 351 aaPredicted RBP7.93□□□□□ -1.14
SNX13-211ENST00000496855 TPP2P29144 1249 aaPredicted RBP7.93□□□□□ -1.14
SNX13-211ENST00000496855 GAB4Q2WGN9 574 aa7.93□□□□□ -1.14
SNX13-211ENST00000496855 NBPF9Q3BBW0 867 aa7.93□□□□□ -1.14
SNX13-211ENST00000496855 TSPYL5Q86VY4 417 aaPredicted RBP7.93□□□□□ -1.14
SNX13-211ENST00000496855 DHRS1Q96LJ7 313 aa7.93□□□□□ -1.14
SNX13-211ENST00000496855 SHISA3A0PJX4 238 aa7.92□□□□□ -1.14
SNX13-211ENST00000496855 ESR1P03372 595 aa7.92□□□□□ -1.14
SNX13-211ENST00000496855 GNL2Q13823 731 aaKnown RBP7.92□□□□□ -1.14
SNX13-211ENST00000496855 UNC5AQ6ZN44 842 aa7.92□□□□□ -1.14
SNX13-211ENST00000496855 OR6P1Q8NGX9 317 aa7.92□□□□□ -1.14
SNX13-211ENST00000496855 CPLX3Q8WVH0 158 aa7.92□□□□□ -1.14
SNX13-211ENST00000496855 SHDQ96IW2 340 aa7.92□□□□□ -1.14
SNX13-211ENST00000496855 ASCC2Q9H1I8 757 aaPredicted RBP7.92□□□□□ -1.14
SNX13-211ENST00000496855 SUCOQ9UBS9 1254 aaKnown RBP7.92□□□□□ -1.14
SNX13-211ENST00000496855 STRIP2Q9ULQ0 834 aa7.92□□□□□ -1.14
SNX13-211ENST00000496855 NMIQ13287 307 aaPredicted RBP7.91□□□□□ -1.14
SNX13-211ENST00000496855 ZYXQ15942 572 aaKnown RBP7.91□□□□□ -1.14
SNX13-211ENST00000496855 VPS37DQ86XT2 251 aa7.91□□□□□ -1.14
SNX13-211ENST00000496855 CREG2Q8IUH2 290 aa7.91□□□□□ -1.14
SNX13-211ENST00000496855 TINF2Q9BSI4 451 aa7.91□□□□□ -1.14
SNX13-211ENST00000496855 MKRN2Q9H000 416 aaKnown RBP7.91□□□□□ -1.14
SNX13-211ENST00000496855 RC3H2Q9HBD1 1191 aaKnown RBP7.91□□□□□ -1.14
SNX13-211ENST00000496855 DUSP13Q9UII6 198 aa7.91□□□□□ -1.14
SNX13-211ENST00000496855 PMS1P54277 932 aaKnown RBP7.9□□□□□ -1.14
SNX13-211ENST00000496855 CLEC16AQ2KHT3 1053 aa7.9□□□□□ -1.14
SNX13-211ENST00000496855 ENOX1Q8TC92 643 aaKnown RBP7.9□□□□□ -1.14
SNX13-211ENST00000496855 TAL1P17542 331 aaPredicted RBP7.89□□□□□ -1.15
SNX13-211ENST00000496855 SNW1Q13573 536 aaKnown RBP7.89□□□□□ -1.15
SNX13-211ENST00000496855 MCTP1Q6DN14 999 aa7.89□□□□□ -1.15
SNX13-211ENST00000496855 TMC3Q7Z5M5 1100 aa7.89□□□□□ -1.15
SNX13-211ENST00000496855 C19orf47Q8N9M1 422 aaKnown RBP7.89□□□□□ -1.15
SNX13-211ENST00000496855 LRRN4CLQ8ND94 238 aa7.89□□□□□ -1.15
SNX13-211ENST00000496855 C9IYK1 514 aa7.88□□□□□ -1.15
SNX13-211ENST00000496855 AUHQ13825 339 aaKnown RBP7.88□□□□□ -1.15
SNX13-211ENST00000496855 TTC6Q86TZ1 520 aa7.88□□□□□ -1.15
SNX13-211ENST00000496855 SYTL5Q8TDW5 730 aaPredicted RBP7.88□□□□□ -1.15
SNX13-211ENST00000496855 HDAC8Q9BY41 377 aa7.88□□□□□ -1.15
SNX13-211ENST00000496855 PRDM14Q9GZV8 571 aa7.88□□□□□ -1.15
SNX13-211ENST00000496855 SLC12A7Q9Y666 1083 aa7.88□□□□□ -1.15
SNX13-211ENST00000496855 LTKP29376 864 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 PPFIBP1Q86W92 1011 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 SMARCC1Q92922 1105 aaPredicted RBP7.87□□□□□ -1.15
SNX13-211ENST00000496855 ALPK1Q96QP1 1244 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 ZNF214Q9UL59 606 aaPredicted RBP7.87□□□□□ -1.15
SNX13-211ENST00000496855 PCDHB12Q9Y5F1 795 aa7.87□□□□□ -1.15
SNX13-211ENST00000496855 LTBP3Q9NS15 1303 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms