RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 TMX2Q9Y320 296 aa18.1■□□□□ 0.49
NEK4-206ENST00000496822 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 H0YGN5 161 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 TFRCP02786 760 aaKnown RBP18.09■□□□□ 0.49
NEK4-206ENST00000496822 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
NEK4-206ENST00000496822 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
NEK4-206ENST00000496822 MX1P20591 662 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 RGS2P41220 211 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 SBK1Q52WX2 424 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 MAP3K21Q5TCX8 1036 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 SEC62Q99442 399 aaKnown RBP18.09■□□□□ 0.49
NEK4-206ENST00000496822 APBA2Q99767 749 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.09■□□□□ 0.49
NEK4-206ENST00000496822 VCPKMTQ9H867 229 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 CWC22Q9HCG8 908 aaKnown RBP18.09■□□□□ 0.49
NEK4-206ENST00000496822 RLFQ13129 1914 aa18.09■□□□□ 0.49
NEK4-206ENST00000496822 RPTORQ8N122 1335 aa18.08■□□□□ 0.49
NEK4-206ENST00000496822 ERC2O15083 957 aa18.08■□□□□ 0.48
NEK4-206ENST00000496822 GLRX3O76003 335 aaKnown RBP18.08■□□□□ 0.48
NEK4-206ENST00000496822 EEF2P13639 858 aaKnown RBP18.08■□□□□ 0.48
NEK4-206ENST00000496822 PRKAR2AP13861 404 aaKnown RBP18.08■□□□□ 0.48
NEK4-206ENST00000496822 ZKSCAN1P17029 563 aaPredicted RBP18.08■□□□□ 0.48
NEK4-206ENST00000496822 CCNA1P78396 465 aa18.08■□□□□ 0.48
NEK4-206ENST00000496822 MAP2K5Q13163 448 aa18.08■□□□□ 0.48
NEK4-206ENST00000496822 WDR78Q5VTH9 848 aa18.08■□□□□ 0.48
NEK4-206ENST00000496822 DIS3LQ8TF46 1054 aaKnown RBP18.08■□□□□ 0.48
NEK4-206ENST00000496822 HMX1Q9NP08 348 aaPredicted RBP18.08■□□□□ 0.48
NEK4-206ENST00000496822 GREB1LQ9C091 1923 aaPredicted RBP18.08■□□□□ 0.48
NEK4-206ENST00000496822 MINDY4BA8MYZ0 360 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 RASA1P20936 1047 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 ATP2B2Q01814 1243 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 COG2Q14746 738 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 ANKRD45Q5TZF3 282 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 GIMAP6Q6P9H5 292 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 LPAR1Q92633 364 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 DPF3Q92784 378 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 GCC1Q96CN9 775 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 ATG4CQ96DT6 458 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 FSD1Q9BTV5 496 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 SH2D4AQ9H788 454 aa18.07■□□□□ 0.48
NEK4-206ENST00000496822 FLOT1O75955 427 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 PTPREP23469 700 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 DSG3P32926 999 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 TDO2P48775 406 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 CACNB2Q08289 660 aaPredicted RBP18.06■□□□□ 0.48
NEK4-206ENST00000496822 HDAC1Q13547 482 aaPredicted RBP18.06■□□□□ 0.48
NEK4-206ENST00000496822 GRB14Q14449 540 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 HABP4Q5JVS0 413 aaKnown RBP18.06■□□□□ 0.48
NEK4-206ENST00000496822 HTATIP2Q9BUP3 242 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 MOV10L1Q9BXT6 1211 aaKnown RBP18.06■□□□□ 0.48
NEK4-206ENST00000496822 KANSL2Q9H9L4 492 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 FLRT1Q9NZU1 646 aa18.06■□□□□ 0.48
NEK4-206ENST00000496822 SLC15A5A6NIM6 579 aa18.05■□□□□ 0.48
NEK4-206ENST00000496822 WDR46O15213 610 aaKnown RBP18.05■□□□□ 0.48
NEK4-206ENST00000496822 GNAT2P19087 354 aa18.05■□□□□ 0.48
NEK4-206ENST00000496822 CCND3P30281 292 aaPredicted RBP18.05■□□□□ 0.48
NEK4-206ENST00000496822 ZMYM1Q5SVZ6 1142 aa18.05■□□□□ 0.48
NEK4-206ENST00000496822 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
NEK4-206ENST00000496822 PAWRQ96IZ0 340 aaKnown RBP18.05■□□□□ 0.48
NEK4-206ENST00000496822 SPATC1LQ9H0A9 340 aa18.05■□□□□ 0.48
NEK4-206ENST00000496822 FBXO28Q9NVF7 368 aa18.05■□□□□ 0.48
NEK4-206ENST00000496822 HOXC10Q9NYD6 342 aa18.05■□□□□ 0.48
NEK4-206ENST00000496822 PRDM1O75626 825 aa18.04■□□□□ 0.48
NEK4-206ENST00000496822 APPP05067 770 aa18.04■□□□□ 0.48
NEK4-206ENST00000496822 MNX1P50219 401 aaPredicted RBP18.04■□□□□ 0.48
NEK4-206ENST00000496822 LRRFIP1Q32MZ4 808 aaKnown RBP18.04■□□□□ 0.48
NEK4-206ENST00000496822 CCDC129Q6ZRS4 1044 aa18.04■□□□□ 0.48
NEK4-206ENST00000496822 TRMT44Q8IYL2 757 aaKnown RBP18.04■□□□□ 0.48
NEK4-206ENST00000496822 IFNL3Q8IZI9 196 aa18.04■□□□□ 0.48
NEK4-206ENST00000496822 NPLOC4Q8TAT6 608 aa18.04■□□□□ 0.48
NEK4-206ENST00000496822 MKNK2Q9HBH9 465 aa18.04■□□□□ 0.48
NEK4-206ENST00000496822 COLQQ9Y215 455 aaPredicted RBP18.04■□□□□ 0.48
NEK4-206ENST00000496822 PARP14Q460N5 1801 aa18.04■□□□□ 0.48
NEK4-206ENST00000496822 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
NEK4-206ENST00000496822 ERCC3P19447 782 aa18.03■□□□□ 0.48
NEK4-206ENST00000496822 OGDHLQ9ULD0 1010 aa18.03■□□□□ 0.48
NEK4-206ENST00000496822 IVNS1ABPQ9Y6Y0 642 aa18.03■□□□□ 0.48
NEK4-206ENST00000496822 ZNF236Q9UL36 1845 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 IGKV6D-41A0A0C4DH26 115 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 FOXP2O15409 715 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 RAD21O60216 631 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 HOXC6P09630 235 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 CAPN2P17655 700 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 PLS1Q14651 629 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 FAM83BQ5T0W9 1011 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 MB21D1Q8N884 522 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 NUP88Q99567 741 aaPredicted RBP18.02■□□□□ 0.48
NEK4-206ENST00000496822 STAP2Q9UGK3 403 aa18.02■□□□□ 0.48
NEK4-206ENST00000496822 CEP290O15078 2479 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 ADORA2AP29274 412 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 PDE1AP54750 535 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 TMEM132BQ14DG7 1078 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 CHRDL2Q6WN34 429 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 NECAB2Q7Z6G3 386 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 ANKLE1Q8NAG6 615 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 SHCBP1Q8NEM2 672 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 GOPCQ9HD26 462 aa18.01■□□□□ 0.47
NEK4-206ENST00000496822 ZBTB47Q9UFB7 747 aaPredicted RBP18.01■□□□□ 0.47
NEK4-206ENST00000496822 ALPK3Q96L96 1907 aa18■□□□□ 0.47
NEK4-206ENST00000496822 CYP2C19P33261 490 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms