RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 LINC00310P59036 64 aa6.49□□□□□ -1.37
CD46-218ENST00000496723 RPL6Q02878 288 aaKnown RBP6.49□□□□□ -1.37
CD46-218ENST00000496723 NR0B2Q15466 257 aa6.49□□□□□ -1.37
CD46-218ENST00000496723 TSPYL5Q86VY4 417 aaPredicted RBP6.49□□□□□ -1.37
CD46-218ENST00000496723 RELL1Q8IUW5 271 aa6.49□□□□□ -1.37
CD46-218ENST00000496723 TMEM87AQ8NBN3 555 aa6.49□□□□□ -1.37
CD46-218ENST00000496723 DHX38Q92620 1227 aaKnown RBP6.49□□□□□ -1.37
CD46-218ENST00000496723 KCNK12Q9HB15 430 aa6.49□□□□□ -1.37
CD46-218ENST00000496723 DUSP13Q9UII6 198 aa6.49□□□□□ -1.37
CD46-218ENST00000496723 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 B8ZZF3 427 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 NUAK1O60285 661 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 GBP2P32456 591 aaPredicted RBP6.48□□□□□ -1.37
CD46-218ENST00000496723 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
CD46-218ENST00000496723 SYTL4Q96C24 671 aaPredicted RBP6.48□□□□□ -1.37
CD46-218ENST00000496723 RSRP1Q9BUV0 290 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 RNF32Q9H0A6 362 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 SLC6A17Q9H1V8 727 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 SP110Q9HB58 689 aa6.48□□□□□ -1.37
CD46-218ENST00000496723 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
CD46-218ENST00000496723 MINDY4BA8MYZ0 360 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 PEX10O60683 326 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 PF4P02776 101 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 ZGLP1P0C6A0 271 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 EGR3Q06889 387 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 CAMK2GQ13555 558 aaPredicted RBP6.47□□□□□ -1.37
CD46-218ENST00000496723 PWP1Q13610 501 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 SNX17Q15036 470 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 CCDC84Q86UT8 332 aaPredicted RBP6.47□□□□□ -1.37
CD46-218ENST00000496723 SPPL2CQ8IUH8 684 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 DTWD2Q8NBA8 298 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 CYB5D2Q8WUJ1 264 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 ACSF2Q96CM8 615 aaPredicted RBP6.47□□□□□ -1.37
CD46-218ENST00000496723 TMEM74Q96NL1 305 aa6.47□□□□□ -1.37
CD46-218ENST00000496723 WASH4PA8MWX3 477 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 SEMA7AO75326 666 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 INHBBP09529 407 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 YARSP54577 528 aaKnown RBP6.46□□□□□ -1.38
CD46-218ENST00000496723 LMNB2Q03252 620 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 HS2ST1Q7LGA3 356 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 ERMP1Q7Z2K6 904 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 RHOVQ96L33 236 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 COPRSQ9NQ92 184 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 KBTBD4Q9NVX7 518 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 GGT7Q9UJ14 662 aa6.46□□□□□ -1.38
CD46-218ENST00000496723 LTKP29376 864 aa6.45□□□□□ -1.38
CD46-218ENST00000496723 TRHRP34981 398 aaPredicted RBP6.45□□□□□ -1.38
CD46-218ENST00000496723 CHRNEQ04844 493 aa6.45□□□□□ -1.38
CD46-218ENST00000496723 TMEM201Q5SNT2 666 aa6.45□□□□□ -1.38
CD46-218ENST00000496723 BNC2Q6ZN30 1099 aaPredicted RBP6.45□□□□□ -1.38
CD46-218ENST00000496723 BAHD1Q8TBE0 780 aaPredicted RBP6.45□□□□□ -1.38
CD46-218ENST00000496723 RNF141Q8WVD5 230 aa6.45□□□□□ -1.38
CD46-218ENST00000496723 C19orf44Q9H6X5 657 aa6.45□□□□□ -1.38
CD46-218ENST00000496723 PODXL2Q9NZ53 605 aa6.45□□□□□ -1.38
CD46-218ENST00000496723 YBX2Q9Y2T7 364 aaKnown RBP6.45□□□□□ -1.38
CD46-218ENST00000496723 CTSWP56202 376 aa6.44□□□□□ -1.38
CD46-218ENST00000496723 DLG4P78352 724 aa6.44□□□□□ -1.38
CD46-218ENST00000496723 FAM160A1Q05DH4 1040 aa6.44□□□□□ -1.38
CD46-218ENST00000496723 SLFN12Q8IYM2 578 aa6.44□□□□□ -1.38
CD46-218ENST00000496723 MRRFQ96E11 262 aaKnown RBP6.44□□□□□ -1.38
CD46-218ENST00000496723 PCDHA11Q9Y5I1 949 aa6.44□□□□□ -1.38
CD46-218ENST00000496723 UNCXA6NJT0 531 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 BPNT1O95861 308 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 RECKO95980 971 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 F13A1P00488 732 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 VAMP1P23763 118 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 ZNF76P36508 570 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 DUSP4Q13115 394 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 SNAP47Q5SQN1 464 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 GOLM1Q8NBJ4 401 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 GATAD2BQ8WXI9 593 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 MCOLN1Q9GZU1 580 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 IRF2BPLQ9H1B7 796 aa6.43□□□□□ -1.38
CD46-218ENST00000496723 ZNF552Q9H707 407 aaPredicted RBP6.43□□□□□ -1.38
CD46-218ENST00000496723 TEX51A0A1B0GUA7 166 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 FAM221AA4D161 298 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 CILPO75339 1184 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 PLCG1P19174 1290 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 EIF4A3P38919 411 aaKnown RBP6.42□□□□□ -1.38
CD46-218ENST00000496723 TIGD5Q53EQ6 642 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 ANKS4BQ8N8V4 417 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 INTS4Q96HW7 963 aaKnown RBP6.42□□□□□ -1.38
CD46-218ENST00000496723 ASPNQ9BXN1 380 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 KIAA1522Q9P206 1035 aaPredicted RBP6.42□□□□□ -1.38
CD46-218ENST00000496723 PRR36Q9H6K5 1346 aa6.42□□□□□ -1.38
CD46-218ENST00000496723 MYOCOSA0A1B0GUC4 107 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 RBAK-RBAKDNI3L0D1 243 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 GARTP22102 1010 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 FANCCQ00597 558 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 TMEM132EQ6IEE7 984 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 FBXL19Q6PCT2 694 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 ZNF605Q86T29 641 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 PARD6AQ9NPB6 346 aa6.41□□□□□ -1.38
CD46-218ENST00000496723 METTL5Q9NRN9 209 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms