RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
C4A-258ENST00000496659 NID2Q14112 1375 aa11.66□□□□□ -0.54
C4A-258ENST00000496659 GOLGA8AA7E2F4 631 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 USP17L5A8MUK1 530 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 NMT2O60551 498 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 CDKL5O76039 1030 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 NOVP48745 357 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
C4A-258ENST00000496659 PRKG1Q13976 671 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 MICU3Q86XE3 530 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 C2orf69Q8N8R5 385 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 FEZ1Q99689 392 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 TMEM47Q9BQJ4 181 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 RBM28Q9NW13 759 aaKnown RBP11.65□□□□□ -0.54
C4A-258ENST00000496659 CLIP2Q9UDT6 1046 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 TPCN1Q9ULQ1 816 aa11.65□□□□□ -0.54
C4A-258ENST00000496659 CPLX1O14810 134 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 USP2O75604 605 aaPredicted RBP11.64□□□□□ -0.55
C4A-258ENST00000496659 CD2BP2O95400 341 aaKnown RBP11.64□□□□□ -0.55
C4A-258ENST00000496659 SLURP2P0DP57 97 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 EEF2P13639 858 aaKnown RBP11.64□□□□□ -0.55
C4A-258ENST00000496659 INPP5BP32019 993 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 GNAQP50148 359 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 USP14P54578 494 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 COL9A3Q14050 684 aaPredicted RBP11.64□□□□□ -0.55
C4A-258ENST00000496659 RCSD1Q6JBY9 416 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 NUP133Q8WUM0 1156 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 GTF3C6Q969F1 213 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 TMX3Q96JJ7 454 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
C4A-258ENST00000496659 GBA2Q9HCG7 927 aaPredicted RBP11.64□□□□□ -0.55
C4A-258ENST00000496659 PRDM10Q9NQV6 1147 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.64□□□□□ -0.55
C4A-258ENST00000496659 ATAD5Q96QE3 1844 aa11.64□□□□□ -0.55
C4A-258ENST00000496659 PFKFB2O60825 505 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 PDIA3P30101 505 aaKnown RBP11.63□□□□□ -0.55
C4A-258ENST00000496659 ECE1P42892 770 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 MAP2K1Q02750 393 aaPredicted RBP11.63□□□□□ -0.55
C4A-258ENST00000496659 STK3Q13188 491 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 VGLL4Q14135 290 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 RRP1BQ14684 758 aaKnown RBP11.63□□□□□ -0.55
C4A-258ENST00000496659 ME3Q16798 604 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 RTN1Q16799 776 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 LRRC47Q8N1G4 583 aaKnown RBP11.63□□□□□ -0.55
C4A-258ENST00000496659 GMCL1P1Q8NEA9 526 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 MKL1Q969V6 931 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 IPO9Q96P70 1041 aaKnown RBP11.63□□□□□ -0.55
C4A-258ENST00000496659 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
C4A-258ENST00000496659 TSKSQ9UJT2 592 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 BRPF3Q9ULD4 1205 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 KIF3AQ9Y496 699 aa11.63□□□□□ -0.55
C4A-258ENST00000496659 CASP8AP2Q9UKL3 1982 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 PARP1P09874 1014 aaKnown RBP11.62□□□□□ -0.55
C4A-258ENST00000496659 PTPRAP18433 802 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 PPATQ06203 517 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 ASPRV1Q53RT3 343 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 GPATCH4Q5T3I0 446 aaKnown RBP11.62□□□□□ -0.55
C4A-258ENST00000496659 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 ZNF280CQ8ND82 737 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 DCAF4Q8WV16 495 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
C4A-258ENST00000496659 INTS4Q96HW7 963 aaKnown RBP11.62□□□□□ -0.55
C4A-258ENST00000496659 LZTS2Q9BRK4 669 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 LLPHQ9BRT6 129 aaKnown RBP11.62□□□□□ -0.55
C4A-258ENST00000496659 WDR18Q9BV38 432 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 TMX2Q9Y320 296 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 SNCAIPQ9Y6H5 919 aa11.62□□□□□ -0.55
C4A-258ENST00000496659 OTOFQ9HC10 1997 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 C19orf81C9J6K1 198 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 USP17L10C9JJH3 530 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 RAD21O60216 631 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 MAP2K2P36507 400 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 SLC1A4P43007 532 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 HUNKP57058 714 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
C4A-258ENST00000496659 SCRN1Q12765 414 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 TROAPQ12815 778 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 CUL4AQ13619 759 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 GRM4Q14833 912 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 SLFN13Q68D06 897 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.61□□□□□ -0.55
C4A-258ENST00000496659 ERO1BQ86YB8 467 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 CCDC83Q8IWF9 413 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 TRIM22Q8IYM9 498 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 FANCBQ8NB91 859 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 LPAR1Q92633 364 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 GMCL1Q96IK5 515 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
C4A-258ENST00000496659 MYL10Q9BUA6 226 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 VCPKMTQ9H867 229 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 SENP2Q9HC62 589 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 TMOD4Q9NZQ9 345 aa11.61□□□□□ -0.55
C4A-258ENST00000496659 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
C4A-258ENST00000496659 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms