RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 GTF2A2P52657 109 aa21.53■■□□□ 1.04
TSSC4-210ENST00000496468 HMGCS2P54868 508 aa21.53■■□□□ 1.04
TSSC4-210ENST00000496468 BACE1P56817 501 aa21.53■■□□□ 1.04
TSSC4-210ENST00000496468 EXOSC10Q01780 885 aaKnown RBP21.53■■□□□ 1.04
TSSC4-210ENST00000496468 PRRT2Q7Z6L0 340 aaPredicted RBP21.53■■□□□ 1.04
TSSC4-210ENST00000496468 SIAH1Q8IUQ4 282 aa21.53■■□□□ 1.04
TSSC4-210ENST00000496468 TMEM47Q9BQJ4 181 aa21.53■■□□□ 1.04
TSSC4-210ENST00000496468 KAT14Q9H8E8 782 aa21.53■■□□□ 1.04
TSSC4-210ENST00000496468 TMX2Q9Y320 296 aa21.53■■□□□ 1.04
TSSC4-210ENST00000496468 RAD21O60216 631 aa21.52■■□□□ 1.04
TSSC4-210ENST00000496468 USP17L2Q6R6M4 530 aa21.52■■□□□ 1.04
TSSC4-210ENST00000496468 VCPKMTQ9H867 229 aa21.52■■□□□ 1.04
TSSC4-210ENST00000496468 LY9Q9HBG7 655 aa21.52■■□□□ 1.04
TSSC4-210ENST00000496468 TMOD4Q9NZQ9 345 aa21.52■■□□□ 1.04
TSSC4-210ENST00000496468 C19orf81C9J6K1 198 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 NOGQ13253 232 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 NFXL1Q6ZNB6 911 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 GMCL1P1Q8NEA9 526 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 IGDCC4Q8TDY8 1250 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 ANKS1AQ92625 1134 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 MKL1Q969V6 931 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 KIF2CQ99661 725 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 GPHNQ9NQX3 736 aaPredicted RBP21.51■■□□□ 1.03
TSSC4-210ENST00000496468 PDRG1Q9NUG6 133 aa21.51■■□□□ 1.03
TSSC4-210ENST00000496468 CCL15-CCL14A0A0B4J2E2 113 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 MANSC4A6NHS7 340 aaPredicted RBP21.5■■□□□ 1.03
TSSC4-210ENST00000496468 CETPP11597 493 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 LIFRP42702 1097 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 DGKZQ13574 1117 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 RABEP1Q15276 862 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 CCL15Q16663 113 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 SH3D19Q5HYK7 790 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 GADL1Q6ZQY3 521 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 Q6ZUG5 572 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 PNMA1Q8ND90 353 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 LPAR1Q92633 364 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 C12orf42Q96LP6 360 aa21.5■■□□□ 1.03
TSSC4-210ENST00000496468 CCDC69A6NI79 296 aa21.49■■□□□ 1.03
TSSC4-210ENST00000496468 NDUFB10O96000 172 aa21.49■■□□□ 1.03
TSSC4-210ENST00000496468 FASTKD5Q7L8L6 764 aaKnown RBP21.49■■□□□ 1.03
TSSC4-210ENST00000496468 PROCA1Q8NCQ7 364 aaPredicted RBP21.49■■□□□ 1.03
TSSC4-210ENST00000496468 MS4A4AQ96JQ5 239 aa21.49■■□□□ 1.03
TSSC4-210ENST00000496468 SENP2Q9HC62 589 aa21.49■■□□□ 1.03
TSSC4-210ENST00000496468 MTMR7Q9Y216 660 aa21.49■■□□□ 1.03
TSSC4-210ENST00000496468 WDR33Q9C0J8 1336 aaKnown RBP21.49■■□□□ 1.03
TSSC4-210ENST00000496468 VCAM1P19320 739 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 NEK4P51957 841 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 SREBF2Q12772 1141 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 CATIPQ7Z7H3 387 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 SGMS1Q86VZ5 419 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 SPICE1Q8N0Z3 855 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 TMTC2Q8N394 836 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 BRF1Q92994 677 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 EMILIN3Q9NT22 766 aa21.48■■□□□ 1.03
TSSC4-210ENST00000496468 F5H6K3 240 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 WDR46O15213 610 aaKnown RBP21.47■■□□□ 1.03
TSSC4-210ENST00000496468 AOC2O75106 756 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 VEGFBP49765 207 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 KLRC3Q07444 240 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 SLFN13Q68D06 897 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 ZNF654Q8IZM8 581 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 FBXL16Q8N461 479 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 BRI3BPQ8WY22 251 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 AGXT2Q9BYV1 514 aa21.47■■□□□ 1.03
TSSC4-210ENST00000496468 ISY1Q9ULR0 285 aaKnown RBP21.47■■□□□ 1.03
TSSC4-210ENST00000496468 DDAH1O94760 285 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 MOGSQ13724 837 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 TOB2Q14106 344 aaPredicted RBP21.46■■□□□ 1.03
TSSC4-210ENST00000496468 CCDC96Q2M329 555 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 KIAA1755Q5JYT7 1200 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 RASGRP2Q7LDG7 609 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 DCAF4Q8WV16 495 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 GMCL1Q96IK5 515 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 AGTPBP1Q9UPW5 1226 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 SLC12A7Q9Y666 1083 aa21.46■■□□□ 1.03
TSSC4-210ENST00000496468 KLF18A0A0U1RQI7 1052 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 TESPA1A2RU30 521 aaPredicted RBP21.45■■□□□ 1.02
TSSC4-210ENST00000496468 PDHBP11177 359 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 SLC1A4P43007 532 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 KIF23Q02241 960 aaPredicted RBP21.45■■□□□ 1.02
TSSC4-210ENST00000496468 ANKRD1Q15327 319 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 TREML2Q5T2D2 321 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 APOA5Q6Q788 366 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 SYNE3Q6ZMZ3 975 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 CHMP4CQ96CF2 233 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 TANGO6Q9C0B7 1094 aa21.45■■□□□ 1.02
TSSC4-210ENST00000496468 RPAP3Q9H6T3 665 aaPredicted RBP21.45■■□□□ 1.02
TSSC4-210ENST00000496468 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
TSSC4-210ENST00000496468 GOLGA8BA8MQT2 603 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 ST18O60284 1047 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 AK2P54819 239 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 APOBRQ0VD83 1088 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 PABPC4Q13310 644 aaKnown RBP eCLIP21.44■■□□□ 1.02
TSSC4-210ENST00000496468 FAM83BQ5T0W9 1011 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 MICU3Q86XE3 530 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 NUP133Q8WUM0 1156 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 ZIC5Q96T25 663 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 NUP88Q99567 741 aaPredicted RBP21.44■■□□□ 1.02
TSSC4-210ENST00000496468 MYL10Q9BUA6 226 aa21.44■■□□□ 1.02
TSSC4-210ENST00000496468 PARP14Q460N5 1801 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms