RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 PRC1O43663 620 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 HMGB1P09429 215 aaKnown RBP17.34■□□□□ 0.37
HDAC9-226ENST00000496026 TOP1P11387 765 aaKnown RBP17.34■□□□□ 0.37
HDAC9-226ENST00000496026 PSMA5P28066 241 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 MOGSQ13724 837 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 ANKRD23Q86SG2 305 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 DGKHQ86XP1 1220 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 SPICE1Q8N0Z3 855 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 LPAR1Q92633 364 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 C12orf42Q96LP6 360 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 BEGAINQ9BUH8 593 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 SYNPO2Q9UMS6 1093 aa17.34■□□□□ 0.37
HDAC9-226ENST00000496026 PHIPQ8WWQ0 1821 aa17.33■□□□□ 0.37
HDAC9-226ENST00000496026 F5H6K3 240 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 PDHXO00330 501 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 ALDH1A1P00352 501 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 NOVP48745 357 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 KLRC3Q07444 240 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDAC9-226ENST00000496026 TMEM67Q5HYA8 995 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 TREML2Q5T2D2 321 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
HDAC9-226ENST00000496026 GPAT2Q6NUI2 795 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 BLOC1S2Q6QNY1 142 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 FAM43AQ8N2R8 423 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
HDAC9-226ENST00000496026 TMEM47Q9BQJ4 181 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 KAT14Q9H8E8 782 aa17.33■□□□□ 0.36
HDAC9-226ENST00000496026 GREB1LQ9C091 1923 aaPredicted RBP17.33■□□□□ 0.36
HDAC9-226ENST00000496026 THSD7BQ9C0I4 1608 aa17.32■□□□□ 0.36
HDAC9-226ENST00000496026 VCAM1P19320 739 aa17.32■□□□□ 0.36
HDAC9-226ENST00000496026 ANTXR2P58335 489 aa17.32■□□□□ 0.36
HDAC9-226ENST00000496026 RCSD1Q6JBY9 416 aa17.32■□□□□ 0.36
HDAC9-226ENST00000496026 DHX32Q7L7V1 743 aaKnown RBP17.32■□□□□ 0.36
HDAC9-226ENST00000496026 TMEM87BQ96K49 555 aa17.32■□□□□ 0.36
HDAC9-226ENST00000496026 RPAP3Q9H6T3 665 aaPredicted RBP17.32■□□□□ 0.36
HDAC9-226ENST00000496026 ZCCHC17Q9NP64 241 aaKnown RBP17.32■□□□□ 0.36
HDAC9-226ENST00000496026 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
HDAC9-226ENST00000496026 NDUFB10O96000 172 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
HDAC9-226ENST00000496026 OSBPP22059 807 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 ANAPC15P60006 121 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 WTAPQ15007 396 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 KIAA1755Q5JYT7 1200 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 SLFN13Q68D06 897 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 JMYQ8N9B5 988 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 GMCL1P1Q8NEA9 526 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 ANKS1AQ92625 1134 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 CHMP4CQ96CF2 233 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 TANGO6Q9C0B7 1094 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 PNMA3Q9UL41 463 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 ISY1Q9ULR0 285 aaKnown RBP17.31■□□□□ 0.36
HDAC9-226ENST00000496026 SLC45A1Q9Y2W3 748 aa17.31■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 WDR46O15213 610 aaKnown RBP17.3■□□□□ 0.36
HDAC9-226ENST00000496026 TRPA1O75762 1119 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 CPA1P15085 419 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
HDAC9-226ENST00000496026 FGD1P98174 961 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 COL9A3Q14050 684 aaPredicted RBP17.3■□□□□ 0.36
HDAC9-226ENST00000496026 SEC23AQ15436 765 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 TAF1CQ15572 869 aaPredicted RBP17.3■□□□□ 0.36
HDAC9-226ENST00000496026 PNMA1Q8ND90 353 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 MTA3Q9BTC8 594 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 LRRC2Q9BYS8 371 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 C22orf23Q9BZE7 217 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 RNF186Q9NXI6 227 aa17.3■□□□□ 0.36
HDAC9-226ENST00000496026 WDR19Q8NEZ3 1342 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
HDAC9-226ENST00000496026 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
HDAC9-226ENST00000496026 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 NFXL1Q6ZNB6 911 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 PARK7Q99497 189 aaKnown RBP17.29■□□□□ 0.36
HDAC9-226ENST00000496026 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
HDAC9-226ENST00000496026 TM6SF1Q9BZW5 370 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 ASCC2Q9H1I8 757 aaPredicted RBP17.29■□□□□ 0.36
HDAC9-226ENST00000496026 ZFYVE28Q9HCC9 887 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 WBP1LQ9NX94 342 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 CYP46A1Q9Y6A2 500 aa17.29■□□□□ 0.36
HDAC9-226ENST00000496026 SH2B2O14492 632 aaPredicted RBP17.28■□□□□ 0.36
HDAC9-226ENST00000496026 CA12O43570 354 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 CYP2C8P10632 490 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 RPS6KB1P23443 525 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 SLC1A4P43007 532 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 CATSPERGQ6ZRH7 1159 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 RUFY3Q7L099 469 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 TMTC2Q8N394 836 aa17.28■□□□□ 0.36
HDAC9-226ENST00000496026 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms