RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CPA4Q9UI42 421 aa22.95■■□□□ 1.26
HDAC4-212ENST00000495497 STX8Q9UNK0 236 aa22.95■■□□□ 1.26
HDAC4-212ENST00000495497 GPR25O00155 361 aa22.94■■□□□ 1.26
HDAC4-212ENST00000495497 HOXA7P31268 230 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-212ENST00000495497 PABPC4Q13310 644 aaKnown RBP eCLIP22.94■■□□□ 1.26
HDAC4-212ENST00000495497 MKL1Q969V6 931 aa22.94■■□□□ 1.26
HDAC4-212ENST00000495497 CHMP4CQ96CF2 233 aa22.94■■□□□ 1.26
HDAC4-212ENST00000495497 KRT23Q9C075 422 aa22.94■■□□□ 1.26
HDAC4-212ENST00000495497 ZSWIM5Q9P217 1185 aa22.94■■□□□ 1.26
HDAC4-212ENST00000495497 TLR2O60603 784 aa22.93■■□□□ 1.26
HDAC4-212ENST00000495497 OSBPP22059 807 aa22.93■■□□□ 1.26
HDAC4-212ENST00000495497 CYB5R4Q7L1T6 521 aa22.93■■□□□ 1.26
HDAC4-212ENST00000495497 ZNF296Q8WUU4 475 aaPredicted RBP22.93■■□□□ 1.26
HDAC4-212ENST00000495497 P2RX7Q99572 595 aaKnown RBP22.93■■□□□ 1.26
HDAC4-212ENST00000495497 CNNM2Q9H8M5 875 aa22.93■■□□□ 1.26
HDAC4-212ENST00000495497 GOPCQ9HD26 462 aa22.93■■□□□ 1.26
HDAC4-212ENST00000495497 TCP11L1Q9NUJ3 509 aa22.93■■□□□ 1.26
HDAC4-212ENST00000495497 ADGRA2Q96PE1 1338 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L15C9J2P7 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L13C9JLJ4 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L11C9JVI0 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L18D6R9N7 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L22D6RA61 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L17D6RBQ6 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L19D6RCP7 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L20D6RJB6 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 F5H6K3 240 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 IRX3P78415 501 aaPredicted RBP22.92■■□□□ 1.26
HDAC4-212ENST00000495497 KLRC3Q07444 240 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 USP17L24Q0WX57 530 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 CATSPERGQ6ZRH7 1159 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 NUP88Q99567 741 aaPredicted RBP22.92■■□□□ 1.26
HDAC4-212ENST00000495497 PNMA3Q9UL41 463 aa22.92■■□□□ 1.26
HDAC4-212ENST00000495497 PEX10O60683 326 aa22.91■■□□□ 1.26
HDAC4-212ENST00000495497 NDUFB10O96000 172 aa22.91■■□□□ 1.26
HDAC4-212ENST00000495497 NOVP48745 357 aa22.91■■□□□ 1.26
HDAC4-212ENST00000495497 TRDNQ13061 729 aa22.91■■□□□ 1.26
HDAC4-212ENST00000495497 COL9A3Q14050 684 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-212ENST00000495497 C17orf99Q6UX52 265 aa22.91■■□□□ 1.26
HDAC4-212ENST00000495497 SMCR8Q8TEV9 937 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-212ENST00000495497 ECM2O94769 699 aaPredicted RBP22.9■■□□□ 1.26
HDAC4-212ENST00000495497 FAM83BQ5T0W9 1011 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 RCSD1Q6JBY9 416 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 CHST3Q7LGC8 479 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 RASEFQ8IZ41 740 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 NCOA7Q8NI08 942 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 LPAR1Q92633 364 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 TMEM47Q9BQJ4 181 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 TANGO6Q9C0B7 1094 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 MTMR7Q9Y216 660 aa22.9■■□□□ 1.26
HDAC4-212ENST00000495497 WDR46O15213 610 aaKnown RBP22.89■■□□□ 1.25
HDAC4-212ENST00000495497 FKTNO75072 461 aa22.89■■□□□ 1.25
HDAC4-212ENST00000495497 REC8O95072 547 aa22.89■■□□□ 1.25
HDAC4-212ENST00000495497 HERVK_113P62684 666 aa22.89■■□□□ 1.25
HDAC4-212ENST00000495497 PPP4R3BQ5MIZ7 849 aa22.89■■□□□ 1.25
HDAC4-212ENST00000495497 SLFN13Q68D06 897 aa22.89■■□□□ 1.25
HDAC4-212ENST00000495497 SAMD1Q6SPF0 538 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-212ENST00000495497 RASGRP2Q7LDG7 609 aa22.89■■□□□ 1.25
HDAC4-212ENST00000495497 RALYLQ86SE5 291 aaKnown RBP22.89■■□□□ 1.25
HDAC4-212ENST00000495497 ZSCAN10Q96SZ4 725 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-212ENST00000495497 BCRP11274 1271 aa22.88■■□□□ 1.25
HDAC4-212ENST00000495497 SP3Q02447 781 aa22.88■■□□□ 1.25
HDAC4-212ENST00000495497 POTEEQ6S8J3 1075 aa22.88■■□□□ 1.25
HDAC4-212ENST00000495497 IQCA1Q86XH1 822 aa22.88■■□□□ 1.25
HDAC4-212ENST00000495497 ANKRD13CQ8N6S4 541 aa22.88■■□□□ 1.25
HDAC4-212ENST00000495497 PRDM10Q9NQV6 1147 aa22.88■■□□□ 1.25
HDAC4-212ENST00000495497 TNKSO95271 1327 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 TOP1P11387 765 aaKnown RBP22.87■■□□□ 1.25
HDAC4-212ENST00000495497 NT5C2P49902 561 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 ANTXR2P58335 489 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 CAP1Q01518 475 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 NOM1Q5C9Z4 860 aaKnown RBP22.87■■□□□ 1.25
HDAC4-212ENST00000495497 RNF20Q5VTR2 975 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 MB21D2Q8IYB1 491 aaPredicted RBP22.87■■□□□ 1.25
HDAC4-212ENST00000495497 ENAHQ8N8S7 591 aaPredicted RBP22.87■■□□□ 1.25
HDAC4-212ENST00000495497 GMCL1P1Q8NEA9 526 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 CD99L2Q8TCZ2 262 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 USP26Q9BXU7 913 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 FBXO28Q9NVF7 368 aa22.87■■□□□ 1.25
HDAC4-212ENST00000495497 FLOT1O75955 427 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 MCCP23508 829 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 HSPA4P34932 840 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 DGKHQ86XP1 1220 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 TTC14Q96N46 770 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 UBAC1Q9BSL1 405 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 TXNRD2Q9NNW7 524 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 SYNPO2Q9UMS6 1093 aa22.86■■□□□ 1.25
HDAC4-212ENST00000495497 MYH4Q9Y623 1939 aa22.85■■□□□ 1.25
HDAC4-212ENST00000495497 SPDYE16A6NNV3 312 aaPredicted RBP22.85■■□□□ 1.25
HDAC4-212ENST00000495497 COG2Q14746 738 aa22.85■■□□□ 1.25
HDAC4-212ENST00000495497 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
HDAC4-212ENST00000495497 CCDC178Q5BJE1 867 aa22.85■■□□□ 1.25
HDAC4-212ENST00000495497 PAGR1Q9BTK6 254 aa22.85■■□□□ 1.25
HDAC4-212ENST00000495497 ARHGAP39Q9C0H5 1083 aa22.85■■□□□ 1.25
HDAC4-212ENST00000495497 RBPJLQ9UBG7 517 aa22.85■■□□□ 1.25
HDAC4-212ENST00000495497 ISY1Q9ULR0 285 aaKnown RBP22.85■■□□□ 1.25
HDAC4-212ENST00000495497 IFIT3O14879 490 aaKnown RBP22.84■■□□□ 1.25
HDAC4-212ENST00000495497 CNMDO75829 334 aa22.84■■□□□ 1.25
HDAC4-212ENST00000495497 SEC24BO95487 1268 aa22.84■■□□□ 1.25
HDAC4-212ENST00000495497 BMP3P12645 472 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 812.1 ms