RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 DOCK3Q8IZD9 2030 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 SGPL1O95470 568 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 APPP05067 770 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 GNAT2P19087 354 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 TDO2P48775 406 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 ATP2B2Q01814 1243 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 PLEKHH3Q7Z736 793 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 USP6NLQ92738 828 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 VCPKMTQ9H867 229 aa17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
RPRD1B-206ENST00000495457 PATL2C9JE40 543 aaKnown RBP17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 RASA1P20936 1047 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 PDE1AP54750 535 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 COG2Q14746 738 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 ZMYM1Q5SVZ6 1142 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 MORN1Q5T089 497 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 WDR78Q5VTH9 848 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 UBE2Q1Q7Z7E8 422 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 EXOC6Q8TAG9 804 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 LPAR1Q92633 364 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 KANSL2Q9H9L4 492 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 CWC22Q9HCG8 908 aaKnown RBP17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 STAP2Q9UGK3 403 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 PLXNB2O15031 1838 aa17.05■□□□□ 0.32
RPRD1B-206ENST00000495457 ROBO3Q96MS0 1386 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 CCNA1P78396 465 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 CCL14Q16627 93 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 SH2D4AQ9H788 454 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 HOXC10Q9NYD6 342 aa17.04■□□□□ 0.32
RPRD1B-206ENST00000495457 PRDM1O75626 825 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 FLOT1O75955 427 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 IGHDP01880 384 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 TFRCP02786 760 aaKnown RBP17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 XRCC5P13010 732 aaKnown RBP17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 DSG3P32926 999 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 RGS2P41220 211 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 AAMPQ13685 434 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 ATG4CQ96DT6 458 aa17.03■□□□□ 0.32
RPRD1B-206ENST00000495457 RPTORQ8N122 1335 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 WDR46O15213 610 aaKnown RBP17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 FARP2O94887 1054 aaPredicted RBP17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 ZKSCAN1P17029 563 aaPredicted RBP17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 PTPREP23469 700 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 MAP2K5Q13163 448 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 MAP3K21Q5TCX8 1036 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 SMC5Q8IY18 1101 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 APBA2Q99767 749 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 MOV10L1Q9BXT6 1211 aaKnown RBP17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 HMX1Q9NP08 348 aaPredicted RBP17.02■□□□□ 0.32
RPRD1B-206ENST00000495457 FOXP2O15409 715 aa17.01■□□□□ 0.31
RPRD1B-206ENST00000495457 RAD21O60216 631 aa17.01■□□□□ 0.31
RPRD1B-206ENST00000495457 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
RPRD1B-206ENST00000495457 SPATC1LQ9H0A9 340 aa17.01■□□□□ 0.31
RPRD1B-206ENST00000495457 NAPBQ9H115 298 aa17.01■□□□□ 0.31
RPRD1B-206ENST00000495457 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
RPRD1B-206ENST00000495457 FBXO28Q9NVF7 368 aa17.01■□□□□ 0.31
RPRD1B-206ENST00000495457 MYH8P13535 1937 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 IGKV6D-41A0A0C4DH26 115 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 SLC15A5A6NIM6 579 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 CACNB2Q08289 660 aaPredicted RBP17■□□□□ 0.31
RPRD1B-206ENST00000495457 GRB14Q14449 540 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 FAM83BQ5T0W9 1011 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 VPS53Q5VIR6 699 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 ZNF444Q8N0Y2 327 aaPredicted RBP17■□□□□ 0.31
RPRD1B-206ENST00000495457 GOPCQ9HD26 462 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 FLRT1Q9NZU1 646 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 SUPT16HQ9Y5B9 1047 aaKnown RBP17■□□□□ 0.31
RPRD1B-206ENST00000495457 IVNS1ABPQ9Y6Y0 642 aa17■□□□□ 0.31
RPRD1B-206ENST00000495457 ERCC3P19447 782 aa16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 CCND3P30281 292 aaPredicted RBP16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 PPARAQ07869 468 aa16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 PLS1Q14651 629 aa16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 TRMT44Q8IYL2 757 aaKnown RBP16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 MB21D1Q8N884 522 aa16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 NPLOC4Q8TAT6 608 aa16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 DIS3LQ8TF46 1054 aaKnown RBP16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 DPF3Q92784 378 aa16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 NUP88Q99567 741 aaPredicted RBP16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 NYAP2Q9P242 653 aa16.99■□□□□ 0.31
RPRD1B-206ENST00000495457 RLFQ13129 1914 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 F5H6K3 240 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 H0YGN5 161 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 KLRC3Q07444 240 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 TMEM132BQ14DG7 1078 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 FAM47AQ5JRC9 791 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
RPRD1B-206ENST00000495457 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms