RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	DPYD	Q12882	1025 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CUL4B	Q13620	913 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	AK7	Q96M32	723 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TTF2	Q9UNY4	1162 aa	Known RBP	15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	HNRNPH2	P55795	449 aa	Known RBP	15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	ST5	P78524	1137 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SEC23A	Q15436	765 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PKN1	Q16512	942 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TSR1	Q2NL82	804 aa	Known RBP	15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TXLNB	Q8N3L3	684 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	MYO5A	Q9Y4I1	1855 aa	Known RBP	15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	WNT7A	O00755	349 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CDC25A	P30304	524 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	LMAN1	P49257	510 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	BRD3	Q15059	726 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CT47A1	Q5JQC4	288 aa	Predicted RBP	15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SLF1	Q9BQI6	1058 aa		15.19	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PPP1R3G	B7ZBB8	358 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CALM1	P0DP23	149 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CALM2	P0DP24	149 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CALM3	P0DP25	149 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	KRT9	P35527	623 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SPAG1	Q07617	926 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PAK1	Q13153	545 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	KRT31	Q15323	416 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SLC4A8	Q2Y0W8	1093 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TMTC1	Q8IUR5	882 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CTAGE15	A4D2H0	777 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	GYPC	P04921	128 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CTAGE8	P0CG41	777 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CAVIN4	Q5BKX8	364 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CTAGE6	Q86UF2	777 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CTAGE4	Q8IX94	777 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	MTMR7	Q9Y216	660 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	USP17L12	C9JPN9	530 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	USP17L21	D6R901	530 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	POTEB2	H3BUK9	544 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	GTF2E1	P29083	439 aa	Predicted RBP	15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	UBXN1	Q04323	297 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CDKAL1	Q5VV42	579 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	NELFB	Q8WX92	580 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CCDC51	Q96ER9	411 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	NAPG	Q99747	312 aa	Predicted RBP	15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	FUT8	Q9BYC5	575 aa		15.18	■□□□□ 0.02
SUPT20H-222	ENST00000495071	NID2	Q14112	1375 aa		15.17	■□□□□ 0.02
SUPT20H-222	ENST00000495071	FAM47A	Q5JRC9	791 aa		15.17	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CYP26C1	Q6V0L0	522 aa		15.17	■□□□□ 0.02
SUPT20H-222	ENST00000495071	RASGRP2	Q7LDG7	609 aa		15.17	■□□□□ 0.02
SUPT20H-222	ENST00000495071	APTX	Q7Z2E3	356 aa	Known RBP	15.17	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SHISA4	Q96DD7	197 aa		15.17	■□□□□ 0.02
SUPT20H-222	ENST00000495071	GUCA1B	Q9UMX6	200 aa		15.17	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SEMA3E	O15041	775 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	EIF3J	O75822	258 aa	Known RBP	15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	ATP6V1A	P38606	617 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	COPB1	P53618	953 aa	Known RBP	15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	RNF216	Q9NWF9	866 aa	Predicted RBP	15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	KCNJ18	B7U540	433 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	ZBTB22	O15209	634 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	STAT6	P42226	847 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	KCNJ12	Q14500	433 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SH3RF1	Q7Z6J0	888 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TFRC	P02786	760 aa	Known RBP	15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	HSP90B2P	Q58FF3	399 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	HDX	Q7Z353	690 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CCDC87	Q9NVE4	849 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	RMND1	Q9NWS8	449 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	VPS18	Q9P253	973 aa		15.16	■□□□□ 0.02
SUPT20H-222	ENST00000495071	NMT2	O60551	498 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PARP10	Q53GL7	1025 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TMTC3	Q6ZXV5	915 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	ANKRD18A	Q8IVF6	992 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	CCDC102A	Q96A19	550 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PDE11A	Q9HCR9	933 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	ABHD10	Q9NUJ1	306 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	XDH	P47989	1333 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	BAZ2B	Q9UIF8	2168 aa	Known RBP	15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TSPY2	A6NKD2	308 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	ATP2C1	P98194	919 aa	Predicted RBP	15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	ACSBG1	Q96GR2	724 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PYM1	Q9BRP8	204 aa	Known RBP	15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	GTPBP6	O43824	516 aa	Predicted RBP	15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	SCG2	P13521	617 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PIP4K2B	P78356	416 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TROAP	Q12815	778 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	PCMTD1	Q96MG8	357 aa	Predicted RBP	15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	GDA	Q9Y2T3	454 aa		15.15	■□□□□ 0.02
SUPT20H-222	ENST00000495071	TUBB2A	Q13885	445 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	PLIN2	Q99541	437 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	TUBB2B	Q9BVA1	445 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	MAGEC2	Q9UBF1	373 aa	Predicted RBP	15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	RWDD2A	Q9UIY3	292 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	PBX1	P40424	430 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	SRBD1	Q8N5C6	995 aa	Known RBP	15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	ANAPC4	Q9UJX5	808 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	WTIP	A6NIX2	430 aa	Predicted RBP	15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	DDAH1	O94760	285 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	RPN1	P04843	607 aa	Known RBP	15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	CRKL	P46109	303 aa	Known RBP	15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	ERVK-24	P63145	666 aa		15.14	■□□□□ 0.01
SUPT20H-222	ENST00000495071	FUT2	Q10981	343 aa		15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms