RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 DGKHQ86XP1 1220 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 IFNL1Q8IU54 200 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 GMCL1P1Q8NEA9 526 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 TTC14Q96N46 770 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 ZSCAN10Q96SZ4 725 aaPredicted RBP13□□□□□ -0.33
KDM1A-205ENST00000494920 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 CFHR5Q9BXR6 569 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 SENP2Q9HC62 589 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 ZCCHC17Q9NP64 241 aaKnown RBP13□□□□□ -0.33
KDM1A-205ENST00000494920 AGTPBP1Q9UPW5 1226 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 SLC45A1Q9Y2W3 748 aa13□□□□□ -0.33
KDM1A-205ENST00000494920 NDUFB10O96000 172 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 SNHG28P0DPA3 235 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 ZKSCAN1P17029 563 aaPredicted RBP12.99□□□□□ -0.33
KDM1A-205ENST00000494920 VCAM1P19320 739 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 HOXA7P31268 230 aaPredicted RBP12.99□□□□□ -0.33
KDM1A-205ENST00000494920 TRDNQ13061 729 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 FASTKD5Q7L8L6 764 aaKnown RBP12.99□□□□□ -0.33
KDM1A-205ENST00000494920 RASGRP2Q7LDG7 609 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 RALYLQ86SE5 291 aaKnown RBP12.99□□□□□ -0.33
KDM1A-205ENST00000494920 IQCA1Q86XH1 822 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 LRRC47Q8N1G4 583 aaKnown RBP12.99□□□□□ -0.33
KDM1A-205ENST00000494920 LPAR1Q92633 364 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 NEK1Q96PY6 1258 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 KIF2CQ99661 725 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 TM6SF1Q9BZW5 370 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
KDM1A-205ENST00000494920 WBP1LQ9NX94 342 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
KDM1A-205ENST00000494920 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
KDM1A-205ENST00000494920 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
KDM1A-205ENST00000494920 PRC1O43663 620 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 TOP1P11387 765 aaKnown RBP12.98□□□□□ -0.33
KDM1A-205ENST00000494920 MCM5P33992 734 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 RBM25P49756 843 aaKnown RBP12.98□□□□□ -0.33
KDM1A-205ENST00000494920 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 JAKMIP1Q96N16 626 aaKnown RBP12.98□□□□□ -0.33
KDM1A-205ENST00000494920 FEZ1Q99689 392 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 LY9Q9HBG7 655 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 STX8Q9UNK0 236 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 CENPFP49454 3210 aa12.98□□□□□ -0.33
KDM1A-205ENST00000494920 F5H6K3 240 aa12.97□□□□□ -0.33
KDM1A-205ENST00000494920 WDR46O15213 610 aaKnown RBP12.97□□□□□ -0.33
KDM1A-205ENST00000494920 CPA1P15085 419 aa12.97□□□□□ -0.33
KDM1A-205ENST00000494920 ATP2B2Q01814 1243 aa12.97□□□□□ -0.33
KDM1A-205ENST00000494920 KLRC3Q07444 240 aa12.97□□□□□ -0.33
KDM1A-205ENST00000494920 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
KDM1A-205ENST00000494920 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
KDM1A-205ENST00000494920 DHX32Q7L7V1 743 aaKnown RBP12.97□□□□□ -0.33
KDM1A-205ENST00000494920 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
KDM1A-205ENST00000494920 GMCL1Q96IK5 515 aa12.97□□□□□ -0.33
KDM1A-205ENST00000494920 BAZ2BQ9UIF8 2168 aaKnown RBP12.97□□□□□ -0.33
KDM1A-205ENST00000494920 PDHXO00330 501 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
KDM1A-205ENST00000494920 RPS6KB1P23443 525 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 MCCP23508 829 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 LIFRP42702 1097 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 CATSPERGQ6ZRH7 1159 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 TMEM87BQ96K49 555 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 TCEANC2Q96MN5 208 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 R3HDMLQ9H3Y0 253 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 RNF186Q9NXI6 227 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 SAGE1Q9NXZ1 904 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 TMOD4Q9NZQ9 345 aa12.96□□□□□ -0.33
KDM1A-205ENST00000494920 SMCHD1A6NHR9 2005 aa12.96□□□□□ -0.34
KDM1A-205ENST00000494920 DOCK3Q8IZD9 2030 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 IFIT3O14879 490 aaKnown RBP12.95□□□□□ -0.34
KDM1A-205ENST00000494920 CA12O43570 354 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 ALDH1A1P00352 501 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 PDHBP11177 359 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 CASTP20810 708 aaKnown RBP12.95□□□□□ -0.34
KDM1A-205ENST00000494920 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
KDM1A-205ENST00000494920 TROAPQ12815 778 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 TMEM67Q5HYA8 995 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 SLFN13Q68D06 897 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 LBX2Q6XYB7 198 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 PNMA1Q8ND90 353 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 TBC1D32Q96NH3 1257 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
KDM1A-205ENST00000494920 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
KDM1A-205ENST00000494920 ASCC2Q9H1I8 757 aaPredicted RBP12.95□□□□□ -0.34
KDM1A-205ENST00000494920 RPAP3Q9H6T3 665 aaPredicted RBP12.95□□□□□ -0.34
KDM1A-205ENST00000494920 MYPNQ86TC9 1320 aa12.94□□□□□ -0.34
KDM1A-205ENST00000494920 USP17L15C9J2P7 530 aa12.94□□□□□ -0.34
KDM1A-205ENST00000494920 USP17L13C9JLJ4 530 aa12.94□□□□□ -0.34
KDM1A-205ENST00000494920 USP17L11C9JVI0 530 aa12.94□□□□□ -0.34
KDM1A-205ENST00000494920 USP17L18D6R9N7 530 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms