RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 IER2Q9BTL4 223 aa5.76□□□□□ -1.49
CMSS1-207ENST00000494412 NCOA5Q9HCD5 579 aaKnown RBP5.76□□□□□ -1.49
CMSS1-207ENST00000494412 ARHGEF4Q9NR80 690 aa5.76□□□□□ -1.49
CMSS1-207ENST00000494412 ATP8A1Q9Y2Q0 1164 aa5.76□□□□□ -1.49
CMSS1-207ENST00000494412 TRAV20A0A0B4J274 112 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 A0A1W2PQU0 124 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 ANKRD34BA5PLL1 514 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 F8W735 103 aaPredicted RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 RGS13O14921 159 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 PDE8AO60658 829 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 GBP1P32455 592 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 SOX5P35711 763 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 ZNF143P52747 638 aaPredicted RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 ERVK-24P63145 666 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 NRG1Q02297 640 aaPredicted RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 RING1Q06587 406 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 HSP90AA2PQ14568 343 aaPredicted RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 DUOXA2Q1HG44 320 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 AKAP4Q5JQC9 854 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 SLC6A19Q695T7 634 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 HEATR6Q6AI08 1181 aaKnown RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 ACAD11Q709F0 780 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 TXNRD3Q86VQ6 643 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 TMEM192Q8IY95 271 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 SLFN12Q8IYM2 578 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 APBA2Q99767 749 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 DHRS4Q9BTZ2 278 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 MRPL18Q9H0U6 180 aaKnown RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 CAAP1Q9H8G2 361 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 AKTIPQ9H8T0 292 aa5.75□□□□□ -1.49
CMSS1-207ENST00000494412 SUCOQ9UBS9 1254 aaKnown RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 MRPS23Q9Y3D9 190 aaKnown RBP5.75□□□□□ -1.49
CMSS1-207ENST00000494412 A0A087X0B3 334 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 TRBV23-1A0A0A0MS06 115 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 C9IYK1 514 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 PLD2O14939 933 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 FANCGO15287 622 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 TMPRSS2O15393 492 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 CLEC3AO75596 197 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 RFPL3O75679 317 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 UBOX5O94941 541 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 IGHA1P01876 353 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 EPHX1P07099 455 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 NFKB2Q00653 900 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 FAM50AQ14320 339 aaKnown RBP5.74□□□□□ -1.49
CMSS1-207ENST00000494412 YOD1Q5VVQ6 348 aaPredicted RBP5.74□□□□□ -1.49
CMSS1-207ENST00000494412 KIAA1211Q6ZU35 1233 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.74□□□□□ -1.49
CMSS1-207ENST00000494412 DDX42Q86XP3 938 aaKnown RBP eCLIP5.74□□□□□ -1.49
CMSS1-207ENST00000494412 HID1Q8IV36 788 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 MRPL41Q8IXM3 137 aaKnown RBP5.74□□□□□ -1.49
CMSS1-207ENST00000494412 LRRN4CLQ8ND94 238 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 ZNF507Q8TCN5 953 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 KISS1RQ969F8 398 aaPredicted RBP5.74□□□□□ -1.49
CMSS1-207ENST00000494412 CCDC74BQ96LY2 380 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 FGD4Q96M96 766 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 HAUS7Q99871 368 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 AARSD1Q9BTE6 412 aaKnown RBP5.74□□□□□ -1.49
CMSS1-207ENST00000494412 FBRSQ9HAH7 460 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 TPSG1Q9NRR2 321 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 MCM8Q9UJA3 840 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 PPP1R9AQ9ULJ8 1098 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 AP4E1Q9UPM8 1137 aa5.74□□□□□ -1.49
CMSS1-207ENST00000494412 KCNQ2O43526 872 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 POU3F3P20264 500 aaPredicted RBP5.73□□□□□ -1.49
CMSS1-207ENST00000494412 PPP2R2AP63151 447 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 NKG7Q16617 165 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 FNDC3BQ53EP0 1204 aaKnown RBP5.73□□□□□ -1.49
CMSS1-207ENST00000494412 EXOSC6Q5RKV6 272 aaKnown RBP5.73□□□□□ -1.49
CMSS1-207ENST00000494412 CNNM4Q6P4Q7 775 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 CDC37L1Q7L3B6 337 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 FMNL3Q8IVF7 1028 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 CCDC144CPQ8IYA2 1237 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 TMEM130Q8N3G9 435 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 BAHD1Q8TBE0 780 aaPredicted RBP5.73□□□□□ -1.49
CMSS1-207ENST00000494412 MEGF10Q96KG7 1140 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 ZNF512BQ96KM6 892 aaPredicted RBP5.73□□□□□ -1.49
CMSS1-207ENST00000494412 CLUHP3Q96NS8 147 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 RUSC1Q9BVN2 902 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 LGR4Q9BXB1 951 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 SUSD2Q9UGT4 822 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 FAN1Q9Y2M0 1017 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 SUGT1Q9Y2Z0 365 aa5.73□□□□□ -1.49
CMSS1-207ENST00000494412 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 ITGAVP06756 1048 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 FURINP09958 794 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 BRDTQ58F21 947 aaPredicted RBP5.72□□□□□ -1.49
CMSS1-207ENST00000494412 AXDND1Q5T1B0 1012 aaPredicted RBP5.72□□□□□ -1.49
CMSS1-207ENST00000494412 DCAF15Q66K64 600 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 ADAT2Q7Z6V5 191 aaKnown RBP5.72□□□□□ -1.49
CMSS1-207ENST00000494412 ZNF227Q86WZ6 799 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 SCUBE1Q8IWY4 988 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 RNF214Q8ND24 703 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 DCAF11Q8TEB1 546 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 SMARCC1Q92922 1105 aaPredicted RBP5.72□□□□□ -1.49
CMSS1-207ENST00000494412 FANCD2OSQ96PS1 177 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
CMSS1-207ENST00000494412 DISC1Q9NRI5 854 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms