RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 STK11IPQ8N1F8 1099 aa26.71■■□□□ 1.87
CDKN2A-206ENST00000494262 TRIB2Q92519 343 aa26.71■■□□□ 1.87
CDKN2A-206ENST00000494262 GCC1Q96CN9 775 aa26.71■■□□□ 1.87
CDKN2A-206ENST00000494262 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.71■■□□□ 1.87
CDKN2A-206ENST00000494262 BTBD7Q9P203 1132 aa26.71■■□□□ 1.87
CDKN2A-206ENST00000494262 TMX2Q9Y320 296 aa26.71■■□□□ 1.87
CDKN2A-206ENST00000494262 TFRCP02786 760 aaKnown RBP26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 APPP05067 770 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 GNAT2P19087 354 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 ATP2B2Q01814 1243 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 COG2Q14746 738 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 MORN1Q5T089 497 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 WDR78Q5VTH9 848 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 SPICE1Q8N0Z3 855 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 LPAR1Q92633 364 aa26.7■■□□□ 1.86
CDKN2A-206ENST00000494262 SALL3Q9BXA9 1300 aa26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 FARP2O94887 1054 aaPredicted RBP26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 XRCC5P13010 732 aaKnown RBP26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 RGS2P41220 211 aa26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 TDO2P48775 406 aa26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 UBE2Q1Q7Z7E8 422 aa26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 USP6NLQ92738 828 aa26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 VCPKMTQ9H867 229 aa26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 EPB41L4AQ9HCS5 686 aaPredicted RBP26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 HOXC10Q9NYD6 342 aa26.69■■□□□ 1.86
CDKN2A-206ENST00000494262 EEF2P13639 858 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-206ENST00000494262 ZKSCAN1P17029 563 aaPredicted RBP26.68■■□□□ 1.86
CDKN2A-206ENST00000494262 SEC62Q99442 399 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-206ENST00000494262 KANSL2Q9H9L4 492 aa26.68■■□□□ 1.86
CDKN2A-206ENST00000494262 MKNK2Q9HBH9 465 aa26.68■■□□□ 1.86
CDKN2A-206ENST00000494262 TRMT44Q8IYL2 757 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-206ENST00000494262 APBA2Q99767 749 aa26.67■■□□□ 1.86
CDKN2A-206ENST00000494262 HMX1Q9NP08 348 aaPredicted RBP26.67■■□□□ 1.86
CDKN2A-206ENST00000494262 CEP290O15078 2479 aa26.67■■□□□ 1.86
CDKN2A-206ENST00000494262 RPTORQ8N122 1335 aa26.66■■□□□ 1.86
CDKN2A-206ENST00000494262 PATL2C9JE40 543 aaKnown RBP26.66■■□□□ 1.86
CDKN2A-206ENST00000494262 CAPN2P17655 700 aa26.66■■□□□ 1.86
CDKN2A-206ENST00000494262 DPF3Q92784 378 aa26.66■■□□□ 1.86
CDKN2A-206ENST00000494262 CRISPLD2Q9H0B8 497 aa26.66■■□□□ 1.86
CDKN2A-206ENST00000494262 ROBO3Q96MS0 1386 aa26.66■■□□□ 1.86
CDKN2A-206ENST00000494262 WDR46O15213 610 aaKnown RBP26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 FLOT1O75955 427 aa26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 PRKAR2AP13861 404 aaKnown RBP26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 RASA1P20936 1047 aa26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 MAP2K5Q13163 448 aa26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 AAMPQ13685 434 aa26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 CCL14Q16627 93 aa26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 ZMYM1Q5SVZ6 1142 aa26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 SAMD1Q6SPF0 538 aaPredicted RBP26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 IVNS1ABPQ9Y6Y0 642 aa26.65■■□□□ 1.86
CDKN2A-206ENST00000494262 SLC15A5A6NIM6 579 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 RAD21O60216 631 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 PTPREP23469 700 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 DSG3P32926 999 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 MAP3K21Q5TCX8 1036 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 IFNL3Q8IZI9 196 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 HTATIP2Q9BUP3 242 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 NACAP1Q9BZK3 213 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 STAP2Q9UGK3 403 aa26.64■■□□□ 1.86
CDKN2A-206ENST00000494262 RLFQ13129 1914 aa26.63■■□□□ 1.85
CDKN2A-206ENST00000494262 MOV10L1Q9BXT6 1211 aaKnown RBP26.63■■□□□ 1.85
CDKN2A-206ENST00000494262 SPATC1LQ9H0A9 340 aa26.63■■□□□ 1.85
CDKN2A-206ENST00000494262 GOPCQ9HD26 462 aa26.63■■□□□ 1.85
CDKN2A-206ENST00000494262 PDE1AP54750 535 aa26.62■■□□□ 1.85
CDKN2A-206ENST00000494262 MB21D1Q8N884 522 aa26.62■■□□□ 1.85
CDKN2A-206ENST00000494262 ATG4CQ96DT6 458 aa26.62■■□□□ 1.85
CDKN2A-206ENST00000494262 ZNF287Q9HBT7 754 aa26.62■■□□□ 1.85
CDKN2A-206ENST00000494262 A0A0G2JMZ2 1700 aa26.62■■□□□ 1.85
CDKN2A-206ENST00000494262 H0YGN5 161 aa26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 PRDM1O75626 825 aa26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 SLC34A2O95436 690 aa26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 CACNB2Q08289 660 aaPredicted RBP26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 GRB14Q14449 540 aa26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 PLS1Q14651 629 aa26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 EVI5LQ96CN4 794 aa26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 NAPBQ9H115 298 aa26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 RWDD1Q9H446 243 aaPredicted RBP26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 GREB1LQ9C091 1923 aaPredicted RBP26.61■■□□□ 1.85
CDKN2A-206ENST00000494262 ZNF444Q8N0Y2 327 aaPredicted RBP26.6■■□□□ 1.85
CDKN2A-206ENST00000494262 LNPKQ9C0E8 428 aa26.6■■□□□ 1.85
CDKN2A-206ENST00000494262 ERCC3P19447 782 aa26.59■■□□□ 1.85
CDKN2A-206ENST00000494262 CCDC129Q6ZRS4 1044 aa26.59■■□□□ 1.85
CDKN2A-206ENST00000494262 SHCBP1Q8NEM2 672 aa26.59■■□□□ 1.85
CDKN2A-206ENST00000494262 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
CDKN2A-206ENST00000494262 DIS3LQ8TF46 1054 aaKnown RBP26.59■■□□□ 1.85
CDKN2A-206ENST00000494262 PAWRQ96IZ0 340 aaKnown RBP26.59■■□□□ 1.85
CDKN2A-206ENST00000494262 FBXO28Q9NVF7 368 aa26.59■■□□□ 1.85
CDKN2A-206ENST00000494262 FAM83BQ5T0W9 1011 aa26.58■■□□□ 1.85
CDKN2A-206ENST00000494262 B4GALNT3Q6L9W6 998 aa26.58■■□□□ 1.85
CDKN2A-206ENST00000494262 ANKLE1Q8NAG6 615 aa26.58■■□□□ 1.85
CDKN2A-206ENST00000494262 FLRT1Q9NZU1 646 aa26.58■■□□□ 1.85
CDKN2A-206ENST00000494262 NYAP2Q9P242 653 aa26.58■■□□□ 1.85
CDKN2A-206ENST00000494262 SLC3A2P08195 630 aaKnown RBP26.57■■□□□ 1.84
CDKN2A-206ENST00000494262 CCND3P30281 292 aaPredicted RBP26.57■■□□□ 1.84
CDKN2A-206ENST00000494262 MFSD14CQ5VZR4 134 aa26.57■■□□□ 1.84
CDKN2A-206ENST00000494262 NECAB2Q7Z6G3 386 aa26.57■■□□□ 1.84
CDKN2A-206ENST00000494262 NCAPG2Q86XI2 1143 aa26.57■■□□□ 1.84
CDKN2A-206ENST00000494262 NPLOC4Q8TAT6 608 aa26.57■■□□□ 1.84
CDKN2A-206ENST00000494262 CLIP2Q9UDT6 1046 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms