RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	VCPKMT	Q9H867	229 aa		11.8	□□□□□ -0.52
MACF1-222	ENST00000494012	RBM8A	Q9Y5S9	174 aa	Known RBP	11.8	□□□□□ -0.52
MACF1-222	ENST00000494012	NEDD4	P46934	1319 aa		11.8	□□□□□ -0.52
MACF1-222	ENST00000494012	MGAM	O43451	1857 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L15	C9J2P7	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L13	C9JLJ4	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L11	C9JVI0	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L18	D6R9N7	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L22	D6RA61	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L17	D6RBQ6	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L19	D6RCP7	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L20	D6RJB6	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	FKTN	O75072	461 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	REC8	O95072	547 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	CYP21A2	P08686	494 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	GCLC	P48506	637 aa	Predicted RBP	11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	USP17L24	Q0WX57	530 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	CCDC178	Q5BJE1	867 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	RNF20	Q5VTR2	975 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	IQCA1	Q86XH1	822 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	SIAH1	Q8IUQ4	282 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	MKL1	Q969V6	931 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	ERO1A	Q96HE7	468 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	TANGO6	Q9C0B7	1094 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	INCENP	Q9NQS7	918 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	TCP11L1	Q9NUJ3	509 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	CLIP2	Q9UDT6	1046 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	STX8	Q9UNK0	236 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012		A0A0G2JMZ2	1700 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	ADGRA2	Q96PE1	1338 aa		11.79	□□□□□ -0.52
MACF1-222	ENST00000494012	WDR46	O15213	610 aa	Known RBP	11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	RAD21	O60216	631 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	KDM4A	O75164	1064 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	SP3	Q02447	781 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	ARHGEF6	Q15052	776 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	RALYL	Q86SE5	291 aa	Known RBP	11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	SPICE1	Q8N0Z3	855 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	GMCL1P1	Q8NEA9	526 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	R3HDML	Q9H3Y0	253 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	IL17RB	Q9NRM6	502 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	TACC3	Q9Y6A5	838 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012	RLF	Q13129	1914 aa		11.78	□□□□□ -0.52
MACF1-222	ENST00000494012		B4E1Z4	1266 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	EIF5B	O60841	1220 aa	Known RBP	11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	HERVK_113	P62684	666 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	KIF22	Q14807	665 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	FAM110C	Q1W6H9	321 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	C17orf99	Q6UX52	265 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	CATSPERG	Q6ZRH7	1159 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	LRRC47	Q8N1G4	583 aa	Known RBP	11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	NCOA7	Q8NI08	942 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	TTC14	Q96N46	770 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	UBAC1	Q9BSL1	405 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	CPA4	Q9UI42	421 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012	MYPN	Q86TC9	1320 aa		11.77	□□□□□ -0.53
MACF1-222	ENST00000494012		E7EWF7	191 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012		F5H6K3	240 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	NMT2	O60551	498 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	FLOT1	O75955	427 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	NDUFB10	O96000	172 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	BCR	P11274	1271 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	TOP1	P11387	765 aa	Known RBP	11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	ZKSCAN1	P17029	563 aa	Predicted RBP	11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	NOV	P48745	357 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	LACTB	P83111	547 aa	Predicted RBP	11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	KLRC3	Q07444	240 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	COG2	Q14746	738 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	HOXC10	Q9NYD6	342 aa		11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	COL11A1	P12107	1806 aa	Predicted RBP	11.76	□□□□□ -0.53
MACF1-222	ENST00000494012	ZSWIM8	A7E2V4	1837 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	SLC27A2	O14975	620 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	EPB41L2	O43491	1005 aa	Known RBP	11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	GNRH1	P01148	92 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	SART3	Q15020	963 aa	Known RBP	11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	NECTIN1	Q15223	517 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	KIAA1755	Q5JYT7	1200 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	FAM83B	Q5T0W9	1011 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	CREB3L3	Q68CJ9	461 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	LBX2	Q6XYB7	198 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	CTU1	Q7Z7A3	348 aa	Known RBP	11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	DGKH	Q86XP1	1220 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	ANKRD13C	Q8N6S4	541 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	MB21D1	Q8N884	522 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	GMCL1	Q96IK5	515 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	P2RX7	Q99572	595 aa	Known RBP	11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	ZSWIM5	Q9P217	1185 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	MORF4L1	Q9UBU8	362 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	TNKS	O95271	1327 aa		11.75	□□□□□ -0.53
MACF1-222	ENST00000494012	ERICH2	A1L162	156 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	BMP3	P12645	472 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	SLC1A4	P43007	532 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	FCGRT	P55899	365 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	KRT32	Q14532	448 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	PKN2	Q16513	984 aa	Known RBP	11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	SLFN13	Q68D06	897 aa		11.74	□□□□□ -0.53

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