RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 CTR9Q6PD62 1173 aa28.43■■■□□ 2.14
RHBDD3-206ENST00000493894 CLEC10AQ8IUN9 316 aa28.43■■■□□ 2.14
RHBDD3-206ENST00000493894 IVNS1ABPQ9Y6Y0 642 aa28.43■■■□□ 2.14
RHBDD3-206ENST00000493894 SMIM22K7EJ46 135 aa28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 RRP1P56182 461 aaKnown RBP28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 MAP2K5Q13163 448 aa28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 COG2Q14746 738 aa28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 APPBP2Q92624 585 aa28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 PAWRQ96IZ0 340 aaKnown RBP28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 TMX2Q9Y320 296 aa28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 PCDHB15Q9Y5E8 787 aa28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 A0A0G2JMZ2 1700 aa28.42■■■□□ 2.14
RHBDD3-206ENST00000493894 ZFYP08048 801 aaPredicted RBP28.41■■■□□ 2.14
RHBDD3-206ENST00000493894 NECAB2Q7Z6G3 386 aa28.41■■■□□ 2.14
RHBDD3-206ENST00000493894 STRBPQ96SI9 672 aaKnown RBP28.41■■■□□ 2.14
RHBDD3-206ENST00000493894 HOXC10Q9NYD6 342 aa28.41■■■□□ 2.14
RHBDD3-206ENST00000493894 TTC41PQ6P2S7 1318 aa28.41■■■□□ 2.14
RHBDD3-206ENST00000493894 CEP290O15078 2479 aa28.4■■■□□ 2.14
RHBDD3-206ENST00000493894 SLC15A5A6NIM6 579 aa28.4■■■□□ 2.14
RHBDD3-206ENST00000493894 CCL14Q16627 93 aa28.4■■■□□ 2.14
RHBDD3-206ENST00000493894 DIS3LQ8TF46 1054 aaKnown RBP28.4■■■□□ 2.14
RHBDD3-206ENST00000493894 VCPKMTQ9H867 229 aa28.4■■■□□ 2.14
RHBDD3-206ENST00000493894 RNF113AO15541 343 aaKnown RBP28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 EVI5O60447 810 aa28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 PTPREP23469 700 aa28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 CACNB2Q08289 660 aaPredicted RBP28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 LRRFIP1Q32MZ4 808 aaKnown RBP28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 CHRDL2Q6WN34 429 aa28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 SIAH1Q8IUQ4 282 aa28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 SPICE1Q8N0Z3 855 aa28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 OSBP2Q969R2 916 aa28.39■■■□□ 2.14
RHBDD3-206ENST00000493894 ERC2O15083 957 aa28.38■■■□□ 2.13
RHBDD3-206ENST00000493894 GRB14Q14449 540 aa28.38■■■□□ 2.13
RHBDD3-206ENST00000493894 KIAA1755Q5JYT7 1200 aa28.38■■■□□ 2.13
RHBDD3-206ENST00000493894 GIMAP6Q6P9H5 292 aa28.38■■■□□ 2.13
RHBDD3-206ENST00000493894 KANSL2Q9H9L4 492 aa28.38■■■□□ 2.13
RHBDD3-206ENST00000493894 WDR46O15213 610 aaKnown RBP28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 FLOT1O75955 427 aa28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 ATP2B2Q01814 1243 aa28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 SBK1Q52WX2 424 aa28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 MB21D1Q8N884 522 aa28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 OGDHLQ9ULD0 1010 aa28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 RLFQ13129 1914 aa28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 ROBO3Q96MS0 1386 aa28.37■■■□□ 2.13
RHBDD3-206ENST00000493894 ZNF236Q9UL36 1845 aa28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 GSG1L2A8MUP6 293 aa28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 GPAA1O43292 621 aa28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 EEF2P13639 858 aaKnown RBP28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 GNAT2P19087 354 aa28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 MOV10L1Q9BXT6 1211 aaKnown RBP28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 NBPF3Q9H094 633 aa28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 SPATC1LQ9H0A9 340 aa28.36■■■□□ 2.13
RHBDD3-206ENST00000493894 HOXC6P09630 235 aa28.35■■■□□ 2.13
RHBDD3-206ENST00000493894 DSG3P32926 999 aa28.35■■■□□ 2.13
RHBDD3-206ENST00000493894 MFSD14CQ5VZR4 134 aa28.35■■■□□ 2.13
RHBDD3-206ENST00000493894 CCND3P30281 292 aaPredicted RBP28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 TDO2P48775 406 aa28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 SHCBP1Q8NEM2 672 aa28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 PI4K2BQ8TCG2 481 aa28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 C11orf49Q9H6J7 331 aa28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 GOPCQ9HD26 462 aa28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 PCDH10Q9P2E7 1040 aa28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 PARP14Q460N5 1801 aa28.34■■■□□ 2.13
RHBDD3-206ENST00000493894 GREB1LQ9C091 1923 aaPredicted RBP28.33■■■□□ 2.13
RHBDD3-206ENST00000493894 FXR1P51114 621 aaKnown RBP eCLIP28.33■■■□□ 2.13
RHBDD3-206ENST00000493894 ATG4CQ96DT6 458 aa28.33■■■□□ 2.13
RHBDD3-206ENST00000493894 MKNK2Q9HBH9 465 aa28.33■■■□□ 2.13
RHBDD3-206ENST00000493894 EPB41L4AQ9HCS5 686 aaPredicted RBP28.33■■■□□ 2.13
RHBDD3-206ENST00000493894 ZBTB47Q9UFB7 747 aaPredicted RBP28.33■■■□□ 2.13
RHBDD3-206ENST00000493894 ALPK3Q96L96 1907 aa28.33■■■□□ 2.13
RHBDD3-206ENST00000493894 MINDY4BA8MYZ0 360 aa28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 M0R2C6 588 aa28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 ERCC3P19447 782 aa28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 MX1P20591 662 aa28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 MNX1P50219 401 aaPredicted RBP28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 PLS1Q14651 629 aa28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 SAMD1Q6SPF0 538 aaPredicted RBP28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 OTUD7AQ8TE49 926 aaPredicted RBP28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 FSD1Q9BTV5 496 aa28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 FLRT1Q9NZU1 646 aa28.32■■■□□ 2.12
RHBDD3-206ENST00000493894 STRNO43815 780 aa28.31■■■□□ 2.12
RHBDD3-206ENST00000493894 APPP05067 770 aa28.31■■■□□ 2.12
RHBDD3-206ENST00000493894 RASA1P20936 1047 aa28.31■■■□□ 2.12
RHBDD3-206ENST00000493894 ADORA2AP29274 412 aa28.31■■■□□ 2.12
RHBDD3-206ENST00000493894 DPP9Q86TI2 863 aa28.31■■■□□ 2.12
RHBDD3-206ENST00000493894 STK11IPQ8N1F8 1099 aa28.31■■■□□ 2.12
RHBDD3-206ENST00000493894 CRBNQ96SW2 442 aa28.31■■■□□ 2.12
RHBDD3-206ENST00000493894 RAD21O60216 631 aa28.3■■■□□ 2.12
RHBDD3-206ENST00000493894 NPLOC4Q8TAT6 608 aa28.3■■■□□ 2.12
RHBDD3-206ENST00000493894 MROH8Q9H579 483 aa28.3■■■□□ 2.12
RHBDD3-206ENST00000493894 ZNF287Q9HBT7 754 aa28.3■■■□□ 2.12
RHBDD3-206ENST00000493894 RBM27Q9P2N5 1060 aaKnown RBP28.3■■■□□ 2.12
RHBDD3-206ENST00000493894 FRMPD3Q5JV73 1810 aa28.29■■■□□ 2.12
RHBDD3-206ENST00000493894 LHX8Q68G74 356 aa28.29■■■□□ 2.12
RHBDD3-206ENST00000493894 NCAPG2Q86XI2 1143 aa28.29■■■□□ 2.12
RHBDD3-206ENST00000493894 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.29■■■□□ 2.12
RHBDD3-206ENST00000493894 C7orf61Q8IZ16 206 aa28.28■■■□□ 2.12
RHBDD3-206ENST00000493894 NACAP1Q9BZK3 213 aa28.28■■■□□ 2.12
RHBDD3-206ENST00000493894 PATL2C9JE40 543 aaKnown RBP28.27■■■□□ 2.12
RHBDD3-206ENST00000493894 FAM83BQ5T0W9 1011 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 271.1 ms