RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 EPSTI1Q96J88 318 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 USP19O94966 1318 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 HAUS7Q99871 368 aa22.22■■□□□ 1.15
RNF40-203ENST00000493683 OTUD7BQ6GQQ9 843 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 H7C1D1 291 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 CMA1P23946 247 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 STX2P32856 288 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 SLC52A2Q9HAB3 445 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 PKD2L1Q9P0L9 805 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 SERTAD1Q9UHV2 236 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 ARHGEF10O15013 1369 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 KCNJ18B7U540 433 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 CTNNA1P35221 906 aaKnown RBP22.21■■□□□ 1.15
RNF40-203ENST00000493683 SARNPP82979 210 aaKnown RBP22.21■■□□□ 1.15
RNF40-203ENST00000493683 KCNJ12Q14500 433 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 TYW1BQ6NUM6 668 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 TMEM63CQ9P1W3 806 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 KLHL14Q9P2G3 628 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 ZBED4O75132 1171 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 ZNF853P0CG23 659 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 TRIM35Q9UPQ4 493 aa22.21■■□□□ 1.15
RNF40-203ENST00000493683 PFKFB1P16118 471 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 DYMQ7RTS9 669 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 BBOF1Q8ND07 529 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 PHKBQ93100 1093 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 RNF123Q5XPI4 1314 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
RNF40-203ENST00000493683 ZNF532Q9HCE3 1301 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 ZSCAN26Q16670 478 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 RUNDC3BQ96NL0 473 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 VCX3AQ9NNX9 186 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 TYW1Q9NV66 732 aaKnown RBP22.2■■□□□ 1.14
RNF40-203ENST00000493683 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 PCDHB13Q9Y5F0 798 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.2■■□□□ 1.14
RNF40-203ENST00000493683 PFKFB2O60825 505 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 XRCC5P13010 732 aaKnown RBP22.2■■□□□ 1.14
RNF40-203ENST00000493683 C2CD5Q86YS7 1000 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 NOSTRINQ8IVI9 506 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 AZI2Q9H6S1 392 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 MAGEF1Q9HAY2 307 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 RIC8AQ9NPQ8 531 aa22.2■■□□□ 1.14
RNF40-203ENST00000493683 PPANQ9NQ55 473 aaKnown RBP22.2■■□□□ 1.14
RNF40-203ENST00000493683 SEPT14Q6ZU15 432 aa22.19■■□□□ 1.14
RNF40-203ENST00000493683 BCL2L12Q9HB09 334 aa22.19■■□□□ 1.14
RNF40-203ENST00000493683 PSDA5PKW4 1024 aaPredicted RBP22.19■■□□□ 1.14
RNF40-203ENST00000493683 MYOCDQ8IZQ8 938 aa22.19■■□□□ 1.14
RNF40-203ENST00000493683 SETSIPP0DME0 302 aa22.19■■□□□ 1.14
RNF40-203ENST00000493683 NOP56O00567 594 aaKnown RBP22.19■■□□□ 1.14
RNF40-203ENST00000493683 ATP8B1O43520 1251 aa22.19■■□□□ 1.14
RNF40-203ENST00000493683 ETF1P62495 437 aaKnown RBP22.19■■□□□ 1.14
RNF40-203ENST00000493683 VPS37BQ9H9H4 285 aa22.19■■□□□ 1.14
RNF40-203ENST00000493683 PNMA6EA0A0J9YXQ4 647 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 H0YCG3 227 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 PNOCQ13519 176 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 MRRFQ96E11 262 aaKnown RBP22.18■■□□□ 1.14
RNF40-203ENST00000493683 JAK2O60674 1132 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 CTDSPL2Q05D32 466 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 MORC3Q14149 939 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 USTQ9Y2C2 406 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 ASXL2Q76L83 1435 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 OTUD6AQ7L8S5 288 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 FAM207AQ9NSI2 230 aaPredicted RBP22.18■■□□□ 1.14
RNF40-203ENST00000493683 PPP2R2CQ9Y2T4 447 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 FAM71BQ8TC56 605 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 LSM14BQ9BX40 385 aaKnown RBP22.18■■□□□ 1.14
RNF40-203ENST00000493683 MIS12Q9H081 205 aa22.18■■□□□ 1.14
RNF40-203ENST00000493683 GNPATO15228 680 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 TBC1D8O95759 1140 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 ME3Q16798 604 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 METTL14Q9HCE5 456 aaKnown RBP22.17■■□□□ 1.14
RNF40-203ENST00000493683 FAM114A2Q9NRY5 505 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 SUPT20HQ8NEM7 779 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 TSC1Q92574 1164 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 AATFQ9NY61 560 aaKnown RBP eCLIP22.17■■□□□ 1.14
RNF40-203ENST00000493683 KCNJ14Q9UNX9 436 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 FAN1Q9Y2M0 1017 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 ABCC4O15439 1325 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 CDC25BP30305 580 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 SLC12A2P55011 1212 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 TRPC6Q9Y210 931 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 ZMYM6O95789 1325 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 PRDM1O75626 825 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 SLC8A1P32418 973 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 C17orf53Q8N3J3 647 aaPredicted RBP22.17■■□□□ 1.14
RNF40-203ENST00000493683 CABLES1Q8TDN4 633 aa22.17■■□□□ 1.14
RNF40-203ENST00000493683 GTPBP6O43824 516 aaPredicted RBP22.16■■□□□ 1.14
RNF40-203ENST00000493683 PPARAQ07869 468 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 NELFCDQ8IXH7 590 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 ZNF654Q8IZM8 581 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 PPP4R1Q8TF05 950 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 PNMA2Q9UL42 364 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 TRMT44Q8IYL2 757 aaKnown RBP22.16■■□□□ 1.14
RNF40-203ENST00000493683 PCP11498 1178 aaKnown RBP22.16■■□□□ 1.14
RNF40-203ENST00000493683 KIF11P52732 1056 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 LONRF3Q496Y0 759 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 HAUS1Q96CS2 278 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 ZSWIM6Q9HCJ5 1215 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 FAM135BQ49AJ0 1406 aa22.16■■□□□ 1.14
RNF40-203ENST00000493683 GNGT1P63211 74 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms