RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 TREML2Q5T2D2 321 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 USP17L2Q6R6M4 530 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 GADL1Q6ZQY3 521 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 IQCA1Q86XH1 822 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 DGKHQ86XP1 1220 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 FAM43AQ8N2R8 423 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 KIF2CQ99661 725 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 C22orf23Q9BZE7 217 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 VCPKMTQ9H867 229 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 ZSWIM6Q9HCJ5 1215 aa14.25□□□□□ -0.13
RHBDF1-211ENST00000493647 SH2B2O14492 632 aaPredicted RBP14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 NDUFB10O96000 172 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 VCAM1P19320 739 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 CASTP20810 708 aaKnown RBP14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 RPS6KB1P23443 525 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 MAP2K2P36507 400 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 TM4SF4P48230 202 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 CCDC178Q5BJE1 867 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 TMEM67Q5HYA8 995 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 DHX32Q7L7V1 743 aaKnown RBP14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 SPICE1Q8N0Z3 855 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 TTC14Q96N46 770 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 UPF3BQ9BZI7 483 aaKnown RBP14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 TM6SF1Q9BZW5 370 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
RHBDF1-211ENST00000493647 WDR19Q8NEZ3 1342 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 F5H6K3 240 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 PSMA5P28066 241 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 USP14P54578 494 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 KLRC3Q07444 240 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 PPP4R3BQ5MIZ7 849 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 FASTKD5Q7L8L6 764 aaKnown RBP14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 ANKRD23Q86SG2 305 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 IFNL1Q8IU54 200 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 PROCA1Q8NCQ7 364 aaPredicted RBP14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 GMCL1P1Q8NEA9 526 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 TBC1D32Q96NH3 1257 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 SH2D4AQ9H788 454 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 TMOD4Q9NZQ9 345 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 SYNPO2Q9UMS6 1093 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 AGTPBP1Q9UPW5 1226 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 PTPRFP10586 1907 aa14.23□□□□□ -0.13
RHBDF1-211ENST00000493647 LOC285556D6RIA3 1793 aa14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 HMGB1P09429 215 aaKnown RBP14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 SREBF2Q12772 1141 aa14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 IFIT1BQ5T764 474 aaKnown RBP14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 SLFN13Q68D06 897 aa14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 RUFY3Q7L099 469 aa14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 TMEM87BQ96K49 555 aa14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
RHBDF1-211ENST00000493647 RAD21O60216 631 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 INHBEP58166 350 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 WTAPQ15007 396 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 SART3Q15020 963 aaKnown RBP14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 PNMA1Q8ND90 353 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 LPAR1Q92633 364 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 RPAP3Q9H6T3 665 aaPredicted RBP14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 KAT14Q9H8E8 782 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 MTMR7Q9Y216 660 aa14.21□□□□□ -0.13
RHBDF1-211ENST00000493647 ERICH2A1L162 156 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 PDHXO00330 501 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 WDR46O15213 610 aaKnown RBP14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 SNHG28P0DPA3 235 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 HOXA7P31268 230 aaPredicted RBP14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 LIFRP42702 1097 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 Q6ZUG5 572 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 GMCL1Q96IK5 515 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 AGXT2Q9BYV1 514 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 R3HDMLQ9H3Y0 253 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 UPF2Q9HAU5 1272 aaKnown RBP14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 BRPF3Q9ULD4 1205 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 CYP46A1Q9Y6A2 500 aa14.2□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L15C9J2P7 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L13C9JLJ4 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L11C9JVI0 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L18D6R9N7 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L22D6RA61 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L17D6RBQ6 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L19D6RCP7 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L20D6RJB6 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 CYP2C8P10632 490 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 PDHBP11177 359 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 USP17L24Q0WX57 530 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 CATSPERGQ6ZRH7 1159 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 KCTD1Q719H9 257 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 SGMS1Q86VZ5 419 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 RAB11FIP4Q86YS3 637 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 REM2Q8IYK8 340 aaPredicted RBP14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 FBXL16Q8N461 479 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 JMYQ8N9B5 988 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms