RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 TMX2Q9Y320 296 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 MYPNQ86TC9 1320 aa11.24□□□□□ -0.61
SGIP1-213ENST00000493564 GNRH1P01148 92 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 SLC3A2P08195 630 aaKnown RBP11.23□□□□□ -0.61
SGIP1-213ENST00000493564 TSPY3P0CV98 308 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 TSPY8P0CW00 308 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 PDE4BQ07343 736 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 FAM110CQ1W6H9 321 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 SLC9C1Q4G0N8 1177 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 GPRC5AQ8NFJ5 357 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 ZNF287Q9HBT7 754 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 CCDC171Q6TFL3 1326 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
SGIP1-213ENST00000493564 CENPFP49454 3210 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 CNMDO75829 334 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 FLT3LGP49771 235 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 ERVK-9P63128 1117 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 ERVK-24P63145 666 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 COG2Q14746 738 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 ALX1Q15699 326 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 RRP12Q5JTH9 1297 aaKnown RBP11.22□□□□□ -0.61
SGIP1-213ENST00000493564 CCAR1Q8IX12 1150 aaKnown RBP11.22□□□□□ -0.61
SGIP1-213ENST00000493564 COA7Q96BR5 231 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 ROBO3Q96MS0 1386 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 IL25Q9H293 177 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 BTBD7Q9P203 1132 aa11.22□□□□□ -0.61
SGIP1-213ENST00000493564 BIN2Q9UBW5 565 aaPredicted RBP11.22□□□□□ -0.61
SGIP1-213ENST00000493564 MYH8P13535 1937 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
SGIP1-213ENST00000493564 HIP1O00291 1037 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 RANBP6O60518 1105 aaKnown RBP11.21□□□□□ -0.61
SGIP1-213ENST00000493564 NMT2O60551 498 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 FLOT1O75955 427 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 ELNP15502 786 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 KCNA4P22459 653 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 PRMT2P55345 433 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 FAM83BQ5T0W9 1011 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 NBPF11Q86T75 865 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 TICAM2Q86XR7 235 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 NEDD1Q8NHV4 660 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 ARMC5Q96C12 935 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 NUP88Q99567 741 aaPredicted RBP11.21□□□□□ -0.61
SGIP1-213ENST00000493564 PORCNQ9H237 461 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 SH2D4AQ9H788 454 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 GOPCQ9HD26 462 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 FBXO28Q9NVF7 368 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 MORF4L1Q9UBU8 362 aa11.21□□□□□ -0.61
SGIP1-213ENST00000493564 HTTP42858 3142 aa11.21□□□□□ -0.62
SGIP1-213ENST00000493564 DOCK3Q8IZD9 2030 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 TSPY2A6NKD2 308 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 F5H6K3 240 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 ADCY3O60266 1144 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 CYP2B6P20813 491 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 GRK4P32298 578 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 DSG3P32926 999 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
SGIP1-213ENST00000493564 KLRC3Q07444 240 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 PLS1Q14651 629 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 MTFR1Q15390 333 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 LRRC47Q8N1G4 583 aaKnown RBP11.2□□□□□ -0.62
SGIP1-213ENST00000493564 NKX2-3Q8TAU0 364 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 LPAR1Q92633 364 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 ATG4CQ96DT6 458 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 ZNF333Q96JL9 665 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 CWC22Q9HCG8 908 aaKnown RBP11.2□□□□□ -0.62
SGIP1-213ENST00000493564 IL17RBQ9NRM6 502 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 HOXC10Q9NYD6 342 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 NYAP2Q9P242 653 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 GJD2Q9UKL4 321 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.2□□□□□ -0.62
SGIP1-213ENST00000493564 RABGAP1Q9Y3P9 1069 aa11.2□□□□□ -0.62
SGIP1-213ENST00000493564 ZNF213O14771 459 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 TTLL1O95922 423 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 NDUFB10O96000 172 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 EN2P19622 333 aaPredicted RBP11.19□□□□□ -0.62
SGIP1-213ENST00000493564 CHMLP26374 656 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 CENPQQ7L2Z9 268 aaPredicted RBP11.19□□□□□ -0.62
SGIP1-213ENST00000493564 GTF3C2Q8WUA4 911 aaPredicted RBP11.19□□□□□ -0.62
SGIP1-213ENST00000493564 MKL1Q969V6 931 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 CCDC136Q96JN2 1154 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
SGIP1-213ENST00000493564 STX8Q9UNK0 236 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 MTMR7Q9Y216 660 aa11.19□□□□□ -0.62
SGIP1-213ENST00000493564 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
SGIP1-213ENST00000493564 NEFLP07196 543 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 MAPK4P31152 587 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 RGS19P49795 217 aa11.18□□□□□ -0.62
SGIP1-213ENST00000493564 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
SGIP1-213ENST00000493564 AKNAD1Q5T1N1 836 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms