RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 HOXD10P28358 340 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 PSMC4P43686 418 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 CAP1Q01518 475 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 LBX2Q6XYB7 198 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 CATSPERGQ6ZRH7 1159 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 SIAH1Q8IUQ4 282 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 RUFY2Q8WXA3 655 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 P2RX7Q99572 595 aaKnown RBP12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 DSCC1Q9BVC3 393 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 SYNPO2Q9UMS6 1093 aa12.65□□□□□ -0.38
CDC42SE1-206ENST00000492796 WDR46O15213 610 aaKnown RBP12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 ORC4O43929 436 aa12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 CHMLP26374 656 aa12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 NT5C2P49902 561 aa12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 NEDD1Q8NHV4 660 aa12.64□□□□□ -0.39
CDC42SE1-206ENST00000492796 MYPNQ86TC9 1320 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 RLFQ13129 1914 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 TNPO2O14787 897 aaKnown RBP12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 TTLL1O95922 423 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 CTGFP29279 349 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 TFAP4Q01664 338 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 GPRC5AQ8NFJ5 357 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 MKL1Q969V6 931 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 CEP95Q96GE4 821 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 MTMR4Q9NYA4 1195 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
CDC42SE1-206ENST00000492796 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 ZNF213O14771 459 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 ERVK-9P63128 1117 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 ERVK-24P63145 666 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 COG2Q14746 738 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 SPICE1Q8N0Z3 855 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 STAG1Q8WVM7 1258 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 COA7Q96BR5 231 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 TXNRD2Q9NNW7 524 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 HOXC10Q9NYD6 342 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 RABGAP1Q9Y3P9 1069 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 PTCH2Q9Y6C5 1203 aa12.62□□□□□ -0.39
CDC42SE1-206ENST00000492796 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 SGSM2O43147 1006 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 RANBP6O60518 1105 aaKnown RBP12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 FLOT1O75955 427 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 MAPK4P31152 587 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 HAND2P61296 217 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 ARMC5Q96C12 935 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 IL25Q9H293 177 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 CLIP2Q9UDT6 1046 aa12.61□□□□□ -0.39
CDC42SE1-206ENST00000492796 F5H6K3 240 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 NDUFB10O96000 172 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 DSG3P32926 999 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 CCNA1P78396 465 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 PRKCZQ05513 592 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 KLRC3Q07444 240 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 SLC9C1Q4G0N8 1177 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 TBC1D10CQ8IV04 446 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 RAET1EQ8TD07 263 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 TACC3Q9Y6A5 838 aa12.6□□□□□ -0.39
CDC42SE1-206ENST00000492796 RAD21O60216 631 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 CNMDO75829 334 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 NOVP48745 357 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 MLLT1Q03111 559 aaPredicted RBP12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 IRF5Q13568 498 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 RRP12Q5JTH9 1297 aaKnown RBP12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 FAM83BQ5T0W9 1011 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 CCAR1Q8IX12 1150 aaKnown RBP12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 SLAIN1Q8ND83 568 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 ESR2Q92731 530 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 INCENPQ9NQS7 918 aa12.59□□□□□ -0.39
CDC42SE1-206ENST00000492796 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms