RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PAGE1O75459 146 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 SLFN14P0C7P3 912 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 ADH6P28332 368 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 PCBP4P57723 403 aaKnown RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 BBS9Q3SYG4 887 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 WIPI1Q5MNZ9 446 aaPredicted RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 WWC2Q6AWC2 1192 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 LRRC47Q8N1G4 583 aaKnown RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 C19orf47Q8N9M1 422 aaKnown RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 SLC16A10Q8TF71 515 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 PPP1R14AQ96A00 147 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 ZC3H12CQ9C0D7 883 aaKnown RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 GCC2Q8IWJ2 1684 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 RBBP6Q7Z6E9 1792 aaKnown RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 GSTP1P09211 210 aaKnown RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 RAG1P15918 1043 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 ETF1P62495 437 aaKnown RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 FAAP100Q0VG06 881 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 POU4F3Q15319 338 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 ZNF837Q96EG3 531 aaPredicted RBP4.1□□□□□ -1.75
SNX13-209ENST00000492626 SLC6A14Q9UN76 642 aa4.1□□□□□ -1.75
SNX13-209ENST00000492626 SLC35F4A4IF30 521 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 RGS20O76081 388 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 ITGA6P23229 1130 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 SMCPP49901 116 aaPredicted RBP4.09□□□□□ -1.75
SNX13-209ENST00000492626 C19orf57Q0VDD7 668 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 CCDC181Q5TID7 509 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 PSAPL1Q6NUJ1 521 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 FAM178BQ8IXR5 827 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 DHRS1Q96LJ7 313 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 PCDH12Q9NPG4 1184 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 AVENQ9NQS1 362 aaPredicted RBP4.09□□□□□ -1.75
SNX13-209ENST00000492626 KLHL3Q9UH77 587 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 ZFYVE9O95405 1425 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 CRYBG1Q9Y4K1 1723 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 SBF2Q86WG5 1849 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 ABCC6O95255 1503 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 GUCY2CP25092 1073 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 MAP3K10Q02779 954 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 ST13P5Q8NFI4 369 aaPredicted RBP4.09□□□□□ -1.75
SNX13-209ENST00000492626 SLC26A8Q96RN1 970 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 CAMKK2Q96RR4 588 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 PSMD1Q99460 953 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 TCEAL9Q9UHQ7 104 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 PLAAQ9Y263 795 aa4.09□□□□□ -1.75
SNX13-209ENST00000492626 ESYT3A0FGR9 886 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 SOBPA7XYQ1 873 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 ESRRAP11474 423 aaPredicted RBP4.09□□□□□ -1.76
SNX13-209ENST00000492626 MAP2K3P46734 347 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 DBN1Q16643 649 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 ZC3H12BQ5HYM0 836 aaKnown RBP4.09□□□□□ -1.76
SNX13-209ENST00000492626 ZNF468Q5VIY5 522 aaPredicted RBP4.09□□□□□ -1.76
SNX13-209ENST00000492626 VHLLQ6RSH7 139 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 CDC37L1Q7L3B6 337 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 LSRQ86X29 649 aaPredicted RBP4.09□□□□□ -1.76
SNX13-209ENST00000492626 UNC5CLQ8IV45 518 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 USP26Q9BXU7 913 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 PHAXQ9H814 394 aaKnown RBP4.09□□□□□ -1.76
SNX13-209ENST00000492626 ATP13A2Q9NQ11 1180 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 SNCAIPQ9Y6H5 919 aa4.09□□□□□ -1.76
SNX13-209ENST00000492626 SPAG9O60271 1321 aaKnown RBP4.08□□□□□ -1.76
SNX13-209ENST00000492626 CCDC163A0A0D9SF12 145 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 GFRA3O60609 400 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 CLCQ05315 142 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 TRIM67Q6ZTA4 783 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 TMEM40Q8WWA1 233 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 PPME1Q9Y570 386 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.08□□□□□ -1.76
SNX13-209ENST00000492626 SOX5P35711 763 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 GYS2P54840 703 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 LAPTM4AQ15012 233 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 GNPTABQ3T906 1256 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 AXDND1Q5T1B0 1012 aaPredicted RBP4.08□□□□□ -1.76
SNX13-209ENST00000492626 KRT27Q7Z3Y8 459 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 TTC6Q86TZ1 520 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 CELF2-AS1Q8N7Q2 184 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 SH2B1Q9NRF2 756 aaPredicted RBP4.08□□□□□ -1.76
SNX13-209ENST00000492626 FRRS1LQ9P0K9 344 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 SOX13Q9UN79 622 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 PXDNQ92626 1479 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 HTR3BO95264 441 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 MMRN1Q13201 1228 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 C2orf27AQ580R0 203 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 C6orf15Q6UXA7 325 aaPredicted RBP4.08□□□□□ -1.76
SNX13-209ENST00000492626 WFDC8Q8IUA0 241 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 EPN3Q9H201 632 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 KRT82Q9NSB4 513 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 TRIM33Q9UPN9 1127 aa4.08□□□□□ -1.76
SNX13-209ENST00000492626 FAM221AA4D161 298 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 NFKBIEO00221 500 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 GJB6O95452 261 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 ASMTLO95671 621 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 PGRP06401 933 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 YARSP54577 528 aaKnown RBP4.07□□□□□ -1.76
SNX13-209ENST00000492626 CASP7P55210 303 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 CTBSQ01459 385 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 FERMT3Q86UX7 667 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 PHACTR4Q8IZ21 702 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 IL22RA1Q8N6P7 574 aa4.07□□□□□ -1.76
SNX13-209ENST00000492626 FAM169BQ8N8A8 192 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms