RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 IL17RBQ9NRM6 502 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 MTMR4Q9NYA4 1195 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 NYAP2Q9P242 653 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 SRRDQ9UH36 339 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 GABRQQ9UN88 632 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 PTCH2Q9Y6C5 1203 aa8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 MKI67P46013 3256 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-204ENST00000492511 ZMYM6O95789 1325 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 ZSWIM8A7E2V4 1837 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 SPDYE16A6NNV3 312 aaPredicted RBP8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 HIP1O00291 1037 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 GNRH1P01148 92 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 NOVP48745 357 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 IRX3P78415 501 aaPredicted RBP8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 TFAP4Q01664 338 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 PRKCZQ05513 592 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 PDE4BQ07343 736 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 LBX2Q6XYB7 198 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 SPICE1Q8N0Z3 855 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 MKL1Q969V6 931 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 CEP95Q96GE4 821 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 ARHGEF10LQ9HCE6 1279 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 DIAPH3Q9NSV4 1193 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 BTBD7Q9P203 1132 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 CLIP2Q9UDT6 1046 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 GJD2Q9UKL4 321 aa8.55□□□□□ -1.04
PDLIM1-204ENST00000492511 PLIN4Q96Q06 1357 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 ORC4O43929 436 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 NMT2O60551 498 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 SLC3A2P08195 630 aaKnown RBP8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 TSPY3P0CV98 308 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 TSPY8P0CW00 308 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 FCGRTP55899 365 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 HAND2P61296 217 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 ERVK-24P63145 666 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 COG2Q14746 738 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 ARHGEF6Q15052 776 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 TBC1D10CQ8IV04 446 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 GPRC5AQ8NFJ5 357 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 LPAR1Q92633 364 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 ARMC5Q96C12 935 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 DSCC1Q9BVC3 393 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 PORCNQ9H237 461 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 ZNF287Q9HBT7 754 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 FBXO28Q9NVF7 368 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 RABGAP1Q9Y3P9 1069 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 MYPNQ86TC9 1320 aa8.54□□□□□ -1.04
PDLIM1-204ENST00000492511 F5H6K3 240 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 TNPO2O14787 897 aaKnown RBP8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 TTLL1O95922 423 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 NDUFB10O96000 172 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 HOXD10P28358 340 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 DSG3P32926 999 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 FLT3LGP49771 235 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 MFAP1P55081 439 aaKnown RBP8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 PRMT2P55345 433 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 PTH1RQ03431 593 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 KLRC3Q07444 240 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 SH3TC2Q8TF17 1288 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 STAG1Q8WVM7 1258 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 ZNF333Q96JL9 665 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 NUP88Q99567 741 aaPredicted RBP8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 PAGR1Q9BTK6 254 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 SH2D4AQ9H788 454 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 HOXC10Q9NYD6 342 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 ADAMTS5Q9UNA0 930 aa8.53□□□□□ -1.04
PDLIM1-204ENST00000492511 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.04
PDLIM1-204ENST00000492511 TSPY2A6NKD2 308 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 ZNF213O14771 459 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 SGSM2O43147 1006 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 MORN1Q5T089 497 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 FAM83BQ5T0W9 1011 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 AKNAD1Q5T1N1 836 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 REPS2Q8NFH8 660 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 GTF3C2Q8WUA4 911 aaPredicted RBP8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 USP6NLQ92738 828 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 ATG4CQ96DT6 458 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 TANGO6Q9C0B7 1094 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 TCP11L1Q9NUJ3 509 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 NEDD4P46934 1319 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 RAD50Q92878 1312 aa8.52□□□□□ -1.05
PDLIM1-204ENST00000492511 POTEFA5A3E0 1075 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 FLOT1O75955 427 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 ELNP15502 786 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 GRK4P32298 578 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 IRF5Q13568 498 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 TMEM132BQ14DG7 1078 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 MTFR1Q15390 333 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 SLC9C1Q4G0N8 1177 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 BMP2KLQ5H9B9 411 aa8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 RRP12Q5JTH9 1297 aaKnown RBP8.51□□□□□ -1.05
PDLIM1-204ENST00000492511 RCSD1Q6JBY9 416 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms