RNA–Protein interactions for RNA: ENST00000492021.6

PDPK1-213, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-213ENST00000492021 TTC14Q96N46 770 aa22.78■■□□□ 1.24
PDPK1-213ENST00000492021 CFHR5Q9BXR6 569 aa22.78■■□□□ 1.24
PDPK1-213ENST00000492021 GOPCQ9HD26 462 aa22.78■■□□□ 1.24
PDPK1-213ENST00000492021 STX8Q9UNK0 236 aa22.78■■□□□ 1.24
PDPK1-213ENST00000492021 MYH4Q9Y623 1939 aa22.78■■□□□ 1.24
PDPK1-213ENST00000492021 VCAM1P19320 739 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 MCCP23508 829 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 PABPC4Q13310 644 aaKnown RBP eCLIP22.77■■□□□ 1.24
PDPK1-213ENST00000492021 RCSD1Q6JBY9 416 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 CYB5R4Q7L1T6 521 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 DGKHQ86XP1 1220 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 GMCL1P1Q8NEA9 526 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 ZSCAN10Q96SZ4 725 aaPredicted RBP22.77■■□□□ 1.24
PDPK1-213ENST00000492021 UBAC1Q9BSL1 405 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 BEGAINQ9BUH8 593 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 RNF186Q9NXI6 227 aa22.77■■□□□ 1.24
PDPK1-213ENST00000492021 PDHXO00330 501 aa22.76■■□□□ 1.23
PDPK1-213ENST00000492021 TOP1P11387 765 aaKnown RBP22.76■■□□□ 1.23
PDPK1-213ENST00000492021 HOXA7P31268 230 aaPredicted RBP22.76■■□□□ 1.23
PDPK1-213ENST00000492021 ANKS1AQ92625 1134 aa22.76■■□□□ 1.23
PDPK1-213ENST00000492021 MTA3Q9BTC8 594 aa22.76■■□□□ 1.23
PDPK1-213ENST00000492021 SNX14Q9Y5W7 946 aa22.76■■□□□ 1.23
PDPK1-213ENST00000492021 TNKSO95271 1327 aa22.76■■□□□ 1.23
PDPK1-213ENST00000492021 SEC24BO95487 1268 aa22.75■■□□□ 1.23
PDPK1-213ENST00000492021 KIAA1755Q5JYT7 1200 aa22.75■■□□□ 1.23
PDPK1-213ENST00000492021 LRRC47Q8N1G4 583 aaKnown RBP22.75■■□□□ 1.23
PDPK1-213ENST00000492021 ENAHQ8N8S7 591 aaPredicted RBP22.75■■□□□ 1.23
PDPK1-213ENST00000492021 ZKSCAN3Q9BRR0 538 aa22.75■■□□□ 1.23
PDPK1-213ENST00000492021 F5H6K3 240 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 WDR46O15213 610 aaKnown RBP22.74■■□□□ 1.23
PDPK1-213ENST00000492021 NDUFB10O96000 172 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 MCM5P33992 734 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 ANTXR2P58335 489 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 KLRC3Q07444 240 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 TAF1CQ15572 869 aaPredicted RBP22.74■■□□□ 1.23
PDPK1-213ENST00000492021 NEK1Q96PY6 1258 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 PARK7Q99497 189 aaKnown RBP22.74■■□□□ 1.23
PDPK1-213ENST00000492021 TMEM47Q9BQJ4 181 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 PNMA3Q9UL41 463 aa22.74■■□□□ 1.23
PDPK1-213ENST00000492021 TRPA1O75762 1119 aa22.73■■□□□ 1.23
PDPK1-213ENST00000492021 SART3Q15020 963 aaKnown RBP22.73■■□□□ 1.23
PDPK1-213ENST00000492021 SEC23AQ15436 765 aa22.73■■□□□ 1.23
PDPK1-213ENST00000492021 ADCK5Q3MIX3 580 aa22.73■■□□□ 1.23
PDPK1-213ENST00000492021 RPAP3Q9H6T3 665 aaPredicted RBP22.73■■□□□ 1.23
PDPK1-213ENST00000492021 WDR19Q8NEZ3 1342 aa22.73■■□□□ 1.23
PDPK1-213ENST00000492021 PCNTO95613 3336 aa22.73■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L15C9J2P7 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L13C9JLJ4 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L11C9JVI0 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L18D6R9N7 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L22D6RA61 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L17D6RBQ6 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L19D6RCP7 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L20D6RJB6 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 HMGB1P09429 215 aaKnown RBP22.72■■□□□ 1.23
PDPK1-213ENST00000492021 USP17L24Q0WX57 530 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 CRHR2Q13324 411 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 SPICE1Q8N0Z3 855 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 GMCL1Q96IK5 515 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 ZFYVE28Q9HCC9 887 aa22.72■■□□□ 1.23
PDPK1-213ENST00000492021 ERICH2A1L162 156 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 IFIT3O14879 490 aaKnown RBP22.71■■□□□ 1.23
PDPK1-213ENST00000492021 PRC1O43663 620 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 HSPA1AP0DMV8 641 aaKnown RBP22.71■■□□□ 1.23
PDPK1-213ENST00000492021 HSPA1BP0DMV9 641 aaKnown RBP22.71■■□□□ 1.23
PDPK1-213ENST00000492021 OSBPP22059 807 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 ANAPC15P60006 121 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 IRX3P78415 501 aaPredicted RBP22.71■■□□□ 1.23
PDPK1-213ENST00000492021 COL9A3Q14050 684 aaPredicted RBP22.71■■□□□ 1.23
PDPK1-213ENST00000492021 SLFN13Q68D06 897 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 CATSPERGQ6ZRH7 1159 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 TMEM87BQ96K49 555 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 ASCC2Q9H1I8 757 aaPredicted RBP22.71■■□□□ 1.23
PDPK1-213ENST00000492021 ADGRA2Q96PE1 1338 aa22.71■■□□□ 1.23
PDPK1-213ENST00000492021 PSMA5P28066 241 aa22.7■■□□□ 1.22
PDPK1-213ENST00000492021 NOM1Q5C9Z4 860 aaKnown RBP22.7■■□□□ 1.22
PDPK1-213ENST00000492021 IFIT1BQ5T764 474 aaKnown RBP22.7■■□□□ 1.22
PDPK1-213ENST00000492021 DHX32Q7L7V1 743 aaKnown RBP22.7■■□□□ 1.22
PDPK1-213ENST00000492021 CHST3Q7LGC8 479 aa22.7■■□□□ 1.22
PDPK1-213ENST00000492021 IL17RAQ96F46 866 aa22.7■■□□□ 1.22
PDPK1-213ENST00000492021 JAKMIP1Q96N16 626 aaKnown RBP22.7■■□□□ 1.22
PDPK1-213ENST00000492021 KAT14Q9H8E8 782 aa22.7■■□□□ 1.22
PDPK1-213ENST00000492021 RAD21O60216 631 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 TLR2O60603 784 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 CYP2C8P10632 490 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 WTAPQ15007 396 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 TMEM67Q5HYA8 995 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 FAM83BQ5T0W9 1011 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 PNMA1Q8ND90 353 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 IGDCC4Q8TDY8 1250 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 TM6SF1Q9BZW5 370 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 TANGO6Q9C0B7 1094 aa22.69■■□□□ 1.22
PDPK1-213ENST00000492021 MYPNQ86TC9 1320 aa22.68■■□□□ 1.22
PDPK1-213ENST00000492021 TBC1D8O95759 1140 aa22.68■■□□□ 1.22
PDPK1-213ENST00000492021 EXOSC10Q01780 885 aaKnown RBP22.68■■□□□ 1.22
PDPK1-213ENST00000492021 DCAF4Q8WV16 495 aa22.68■■□□□ 1.22
PDPK1-213ENST00000492021 SH2B2O14492 632 aaPredicted RBP22.67■■□□□ 1.22
PDPK1-213ENST00000492021 FOXN1O15353 648 aa22.67■■□□□ 1.22
PDPK1-213ENST00000492021 SNHG28P0DPA3 235 aa22.67■■□□□ 1.22
PDPK1-213ENST00000492021 BMP3P12645 472 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms