RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 E7EWF7 191 aa23.09■■□□□ 1.29
SEC22A-209ENST00000491366 REC8O95072 547 aa23.09■■□□□ 1.29
SEC22A-209ENST00000491366 OSBPP22059 807 aa23.09■■□□□ 1.29
SEC22A-209ENST00000491366 IRX3P78415 501 aaPredicted RBP23.09■■□□□ 1.29
SEC22A-209ENST00000491366 TRDNQ13061 729 aa23.09■■□□□ 1.29
SEC22A-209ENST00000491366 STOX1Q6ZVD7 989 aa23.09■■□□□ 1.29
SEC22A-209ENST00000491366 RPAP3Q9H6T3 665 aaPredicted RBP23.09■■□□□ 1.29
SEC22A-209ENST00000491366 PNMA3Q9UL41 463 aa23.09■■□□□ 1.29
SEC22A-209ENST00000491366 NECTIN1Q15223 517 aa23.08■■□□□ 1.29
SEC22A-209ENST00000491366 PPP4R3BQ5MIZ7 849 aa23.08■■□□□ 1.29
SEC22A-209ENST00000491366 RALYLQ86SE5 291 aaKnown RBP23.08■■□□□ 1.29
SEC22A-209ENST00000491366 SMCR8Q8TEV9 937 aaPredicted RBP23.08■■□□□ 1.29
SEC22A-209ENST00000491366 ASCC2Q9H1I8 757 aaPredicted RBP23.08■■□□□ 1.29
SEC22A-209ENST00000491366 CPA4Q9UI42 421 aa23.08■■□□□ 1.29
SEC22A-209ENST00000491366 GPR25O00155 361 aa23.07■■□□□ 1.28
SEC22A-209ENST00000491366 LPAR1Q92633 364 aa23.07■■□□□ 1.28
SEC22A-209ENST00000491366 CHMP4CQ96CF2 233 aa23.07■■□□□ 1.28
SEC22A-209ENST00000491366 TANGO6Q9C0B7 1094 aa23.07■■□□□ 1.28
SEC22A-209ENST00000491366 TCP11L1Q9NUJ3 509 aa23.07■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L15C9J2P7 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L13C9JLJ4 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L11C9JVI0 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L18D6R9N7 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L22D6RA61 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L17D6RBQ6 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L19D6RCP7 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L20D6RJB6 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 TLR2O60603 784 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 HOXA7P31268 230 aaPredicted RBP23.06■■□□□ 1.28
SEC22A-209ENST00000491366 USP17L24Q0WX57 530 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 RNF20Q5VTR2 975 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 IQCA1Q86XH1 822 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 NCOA7Q8NI08 942 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 MKL1Q969V6 931 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 ZSWIM5Q9P217 1185 aa23.06■■□□□ 1.28
SEC22A-209ENST00000491366 F5H6K3 240 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 NDUFB10O96000 172 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 NT5C2P49902 561 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 KLRC3Q07444 240 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 CYB5R4Q7L1T6 521 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 ZNF296Q8WUU4 475 aaPredicted RBP23.05■■□□□ 1.28
SEC22A-209ENST00000491366 NUP88Q99567 741 aaPredicted RBP23.05■■□□□ 1.28
SEC22A-209ENST00000491366 P2RX7Q99572 595 aaKnown RBP23.05■■□□□ 1.28
SEC22A-209ENST00000491366 UBAC1Q9BSL1 405 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 MTMR7Q9Y216 660 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 ADGRA2Q96PE1 1338 aa23.05■■□□□ 1.28
SEC22A-209ENST00000491366 WDR46O15213 610 aaKnown RBP23.04■■□□□ 1.28
SEC22A-209ENST00000491366 FAM83BQ5T0W9 1011 aa23.04■■□□□ 1.28
SEC22A-209ENST00000491366 SAMD1Q6SPF0 538 aaPredicted RBP23.04■■□□□ 1.28
SEC22A-209ENST00000491366 CATSPERGQ6ZRH7 1159 aa23.04■■□□□ 1.28
SEC22A-209ENST00000491366 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
SEC22A-209ENST00000491366 ISY1Q9ULR0 285 aaKnown RBP23.04■■□□□ 1.28
SEC22A-209ENST00000491366 MYH4Q9Y623 1939 aa23.04■■□□□ 1.28
SEC22A-209ENST00000491366 FKTNO75072 461 aa23.03■■□□□ 1.28
SEC22A-209ENST00000491366 TOP1P11387 765 aaKnown RBP23.03■■□□□ 1.28
SEC22A-209ENST00000491366 SLFN13Q68D06 897 aa23.03■■□□□ 1.28
SEC22A-209ENST00000491366 GMCL1P1Q8NEA9 526 aa23.03■■□□□ 1.28
SEC22A-209ENST00000491366 TMEM47Q9BQJ4 181 aa23.03■■□□□ 1.28
SEC22A-209ENST00000491366 SYNPO2Q9UMS6 1093 aa23.03■■□□□ 1.28
SEC22A-209ENST00000491366 ECM2O94769 699 aaPredicted RBP23.02■■□□□ 1.28
SEC22A-209ENST00000491366 ZKSCAN1P17029 563 aaPredicted RBP23.02■■□□□ 1.28
SEC22A-209ENST00000491366 NOVP48745 357 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 HERVK_113P62684 666 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 CCDC178Q5BJE1 867 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 RCSD1Q6JBY9 416 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 C17orf99Q6UX52 265 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 CHST3Q7LGC8 479 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 RASEFQ8IZ41 740 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 TNKSO95271 1327 aa23.02■■□□□ 1.28
SEC22A-209ENST00000491366 FLOT1O75955 427 aa23.01■■□□□ 1.27
SEC22A-209ENST00000491366 SP3Q02447 781 aa23.01■■□□□ 1.27
SEC22A-209ENST00000491366 NOM1Q5C9Z4 860 aaKnown RBP23.01■■□□□ 1.27
SEC22A-209ENST00000491366 MB21D2Q8IYB1 491 aaPredicted RBP23.01■■□□□ 1.27
SEC22A-209ENST00000491366 ANKRD13CQ8N6S4 541 aa23.01■■□□□ 1.27
SEC22A-209ENST00000491366 ENAHQ8N8S7 591 aaPredicted RBP23.01■■□□□ 1.27
SEC22A-209ENST00000491366 TTC14Q96N46 770 aa23.01■■□□□ 1.27
SEC22A-209ENST00000491366 HSPA4P34932 840 aa23■■□□□ 1.27
SEC22A-209ENST00000491366 GCLCP48506 637 aaPredicted RBP23■■□□□ 1.27
SEC22A-209ENST00000491366 RASGRP2Q7LDG7 609 aa23■■□□□ 1.27
SEC22A-209ENST00000491366 DGKHQ86XP1 1220 aa23■■□□□ 1.27
SEC22A-209ENST00000491366 PAGR1Q9BTK6 254 aa23■■□□□ 1.27
SEC22A-209ENST00000491366 PRDM10Q9NQV6 1147 aa23■■□□□ 1.27
SEC22A-209ENST00000491366 IFIT3O14879 490 aaKnown RBP22.99■■□□□ 1.27
SEC22A-209ENST00000491366 PEX10O60683 326 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 BCRP11274 1271 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 MCCP23508 829 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 COG2Q14746 738 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 CD99L2Q8TCZ2 262 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 USP26Q9BXU7 913 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 KAT14Q9H8E8 782 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 FBXO28Q9NVF7 368 aa22.99■■□□□ 1.27
SEC22A-209ENST00000491366 ERICH2A1L162 156 aa22.98■■□□□ 1.27
SEC22A-209ENST00000491366 SPDYE16A6NNV3 312 aaPredicted RBP22.98■■□□□ 1.27
SEC22A-209ENST00000491366 BMP3P12645 472 aa22.98■■□□□ 1.27
SEC22A-209ENST00000491366 SLC1A4P43007 532 aa22.98■■□□□ 1.27
SEC22A-209ENST00000491366 ANTXR2P58335 489 aa22.98■■□□□ 1.27
SEC22A-209ENST00000491366 COL9A3Q14050 684 aaPredicted RBP22.98■■□□□ 1.27
SEC22A-209ENST00000491366 CCDC96Q2M329 555 aa22.98■■□□□ 1.27
SEC22A-209ENST00000491366 IFIT1BQ5T764 474 aaKnown RBP22.98■■□□□ 1.27
SEC22A-209ENST00000491366 PRC1O43663 620 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms