RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 USP17L13C9JLJ4 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 USP17L11C9JVI0 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 USP17L18D6R9N7 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 USP17L22D6RA61 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 USP17L17D6RBQ6 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 USP17L19D6RCP7 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 USP17L20D6RJB6 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 FOXP2O15409 715 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 PRDM1O75626 825 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 RASA1P20936 1047 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 PRMT2P55345 433 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 ICA1Q05084 483 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 USP17L24Q0WX57 530 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 KIAA1755Q5JYT7 1200 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 RAET1EQ8TD07 263 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 NAPBQ9H115 298 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 RPAP3Q9H6T3 665 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 MKNK2Q9HBH9 465 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
SOX2-OT-212ENST00000491282 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 EEF2P13639 858 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 PDE4AP27815 886 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 FLT3LGP49771 235 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 MLLT1Q03111 559 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 Q3C1V9 767 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 NBPF11Q86T75 865 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 SPICE1Q8N0Z3 855 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 GPRC5AQ8NFJ5 357 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 ZNF333Q96JL9 665 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 PAGR1Q9BTK6 254 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 LOC285556D6RIA3 1793 aa13.65□□□□□ -0.22
SOX2-OT-212ENST00000491282 PPARAQ07869 468 aa13.64□□□□□ -0.23
SOX2-OT-212ENST00000491282 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
SOX2-OT-212ENST00000491282 COA7Q96BR5 231 aa13.64□□□□□ -0.23
SOX2-OT-212ENST00000491282 ARHGEF10LQ9HCE6 1279 aa13.64□□□□□ -0.23
SOX2-OT-212ENST00000491282 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
SOX2-OT-212ENST00000491282 TMX2Q9Y320 296 aa13.64□□□□□ -0.23
SOX2-OT-212ENST00000491282 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 SDSP20132 328 aa13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 GRK4P32298 578 aa13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 CTDSPL2Q05D32 466 aa13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 MCMDC2Q4G0Z9 681 aa13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 ZNF589Q86UQ0 364 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 ZNF444Q8N0Y2 327 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-212ENST00000491282 RAD21O60216 631 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 ADCY3O60266 1144 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 CNMDO75829 334 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 ELNP15502 786 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 ERVK-24P63145 666 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 MTFR1Q15390 333 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 FAM47AQ5JRC9 791 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 PORCNQ9H237 461 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 SH2D4AQ9H788 454 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 VCPKMTQ9H867 229 aa13.62□□□□□ -0.23
SOX2-OT-212ENST00000491282 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 EN2P19622 333 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 PDE4BQ07343 736 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 COG2Q14746 738 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 CCAR1Q8IX12 1150 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 LPAR1Q92633 364 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 BTBD7Q9P203 1132 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 RABGAP1Q9Y3P9 1069 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 TACC3Q9Y6A5 838 aa13.61□□□□□ -0.23
SOX2-OT-212ENST00000491282 HTTP42858 3142 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 IGKV6D-41A0A0C4DH26 115 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 FGAP02671 866 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 TFAP4Q01664 338 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 ALX1Q15699 326 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 WDR78Q5VTH9 848 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 DIAPH3Q9NSV4 1193 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 HOXC10Q9NYD6 342 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
SOX2-OT-212ENST00000491282 WDR46O15213 610 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-212ENST00000491282 FLOT1O75955 427 aa13.59□□□□□ -0.23
SOX2-OT-212ENST00000491282 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms