RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 COG2Q14746 738 aa21.58■■□□□ 1.05
HMGN1-219ENST00000491183 SOCS4Q8WXH5 440 aa21.58■■□□□ 1.05
HMGN1-219ENST00000491183 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.58■■□□□ 1.05
HMGN1-219ENST00000491183 CRISPLD2Q9H0B8 497 aa21.58■■□□□ 1.05
HMGN1-219ENST00000491183 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.58■■□□□ 1.054e-10■■■■□ 24
HMGN1-219ENST00000491183 ARHGEF10LQ9HCE6 1279 aa21.58■■□□□ 1.05
HMGN1-219ENST00000491183 EPB41L4AQ9HCS5 686 aaPredicted RBP21.58■■□□□ 1.05
HMGN1-219ENST00000491183 MINDY4BA8MYZ0 360 aa21.57■■□□□ 1.04
HMGN1-219ENST00000491183 EEF2P13639 858 aaKnown RBP21.57■■□□□ 1.04
HMGN1-219ENST00000491183 STK11IPQ8N1F8 1099 aa21.57■■□□□ 1.04
HMGN1-219ENST00000491183 VCPKMTQ9H867 229 aa21.57■■□□□ 1.04
HMGN1-219ENST00000491183 HOXC10Q9NYD6 342 aa21.57■■□□□ 1.04
HMGN1-219ENST00000491183 RPTORQ8N122 1335 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 TFRCP02786 760 aaKnown RBP21.56■■□□□ 1.04
HMGN1-219ENST00000491183 RASA1P20936 1047 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 CCNA1P78396 465 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 CCL14Q16627 93 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 LPAR1Q92633 364 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 GCC1Q96CN9 775 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 KANSL2Q9H9L4 492 aa21.56■■□□□ 1.04
HMGN1-219ENST00000491183 PATL2C9JE40 543 aaKnown RBP21.55■■□□□ 1.04
HMGN1-219ENST00000491183 FARP2O94887 1054 aaPredicted RBP21.55■■□□□ 1.04
HMGN1-219ENST00000491183 GNAT2P19087 354 aa21.55■■□□□ 1.04
HMGN1-219ENST00000491183 LRRFIP1Q32MZ4 808 aaKnown RBP21.55■■□□□ 1.04
HMGN1-219ENST00000491183 ZMYM1Q5SVZ6 1142 aa21.55■■□□□ 1.04
HMGN1-219ENST00000491183 MAP3K21Q5TCX8 1036 aa21.55■■□□□ 1.04
HMGN1-219ENST00000491183 FSD1Q9BTV5 496 aa21.55■■□□□ 1.04
HMGN1-219ENST00000491183 SH2D4AQ9H788 454 aa21.55■■□□□ 1.04
HMGN1-219ENST00000491183 HMX1Q9NP08 348 aaPredicted RBP21.55■■□□□ 1.04
HMGN1-219ENST00000491183 STAP2Q9UGK3 403 aa21.55■■□□□ 1.04
HMGN1-219ENST00000491183 GREB1LQ9C091 1923 aaPredicted RBP21.55■■□□□ 1.04
HMGN1-219ENST00000491183 ROBO3Q96MS0 1386 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 SLC34A2O95436 690 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 PTPREP23469 700 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 DSG3P32926 999 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 RGS2P41220 211 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 ATP2B2Q01814 1243 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 MAP2K5Q13163 448 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 IFNL3Q8IZI9 196 aa21.54■■□□□ 1.04
HMGN1-219ENST00000491183 APPP05067 770 aa21.53■■□□□ 1.04
HMGN1-219ENST00000491183 CAPN2P17655 700 aa21.53■■□□□ 1.04
HMGN1-219ENST00000491183 TDO2P48775 406 aa21.53■■□□□ 1.04
HMGN1-219ENST00000491183 WDR78Q5VTH9 848 aa21.53■■□□□ 1.04
HMGN1-219ENST00000491183 TRMT44Q8IYL2 757 aaKnown RBP21.53■■□□□ 1.04
HMGN1-219ENST00000491183 MOV10L1Q9BXT6 1211 aaKnown RBP21.53■■□□□ 1.04
HMGN1-219ENST00000491183 MKNK2Q9HBH9 465 aa21.53■■□□□ 1.04
HMGN1-219ENST00000491183 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
HMGN1-219ENST00000491183 ZBTB47Q9UFB7 747 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-219ENST00000491183 PARP14Q460N5 1801 aa21.52■■□□□ 1.04
HMGN1-219ENST00000491183 A0A0G2JMZ2 1700 aa21.52■■□□□ 1.04
HMGN1-219ENST00000491183 SLC15A5A6NIM6 579 aa21.52■■□□□ 1.04
HMGN1-219ENST00000491183 WDR46O15213 610 aaKnown RBP21.52■■□□□ 1.04
HMGN1-219ENST00000491183 PRKAR2AP13861 404 aaKnown RBP21.52■■□□□ 1.04
HMGN1-219ENST00000491183 ZKSCAN1P17029 563 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-219ENST00000491183 PDE1AP54750 535 aa21.52■■□□□ 1.04
HMGN1-219ENST00000491183 CACNB2Q08289 660 aaPredicted RBP21.52■■□□□ 1.04
HMGN1-219ENST00000491183 DPF3Q92784 378 aa21.52■■□□□ 1.04
HMGN1-219ENST00000491183 ATG4CQ96DT6 458 aa21.52■■□□□ 1.04
HMGN1-219ENST00000491183 APBA2Q99767 749 aa21.52■■□□□ 1.04
HMGN1-219ENST00000491183 H0YGN5 161 aa21.51■■□□□ 1.03
HMGN1-219ENST00000491183 FLOT1O75955 427 aa21.51■■□□□ 1.03
HMGN1-219ENST00000491183 AAMPQ13685 434 aa21.51■■□□□ 1.03
HMGN1-219ENST00000491183 SPATC1LQ9H0A9 340 aa21.51■■□□□ 1.03
HMGN1-219ENST00000491183 FLRT1Q9NZU1 646 aa21.51■■□□□ 1.03
HMGN1-219ENST00000491183 FOXP2O15409 715 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 GRB14Q14449 540 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 SMC5Q8IY18 1101 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 EXOC6Q8TAG9 804 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 NPLOC4Q8TAT6 608 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 PAWRQ96IZ0 340 aaKnown RBP21.5■■□□□ 1.03
HMGN1-219ENST00000491183 HTATIP2Q9BUP3 242 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 FBXO28Q9NVF7 368 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 ADAMTS5Q9UNA0 930 aa21.5■■□□□ 1.03
HMGN1-219ENST00000491183 IGKV6D-41A0A0C4DH26 115 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 PRDM1O75626 825 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 IGHDP01880 384 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 HOXC6P09630 235 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 CCND3P30281 292 aaPredicted RBP21.49■■□□□ 1.03
HMGN1-219ENST00000491183 MNX1P50219 401 aaPredicted RBP21.49■■□□□ 1.03
HMGN1-219ENST00000491183 CCDC129Q6ZRS4 1044 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 ZNF444Q8N0Y2 327 aaPredicted RBP21.49■■□□□ 1.03
HMGN1-219ENST00000491183 MB21D1Q8N884 522 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 SHCBP1Q8NEM2 672 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 DIS3LQ8TF46 1054 aaKnown RBP21.49■■□□□ 1.03
HMGN1-219ENST00000491183 EVI5LQ96CN4 794 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 GOPCQ9HD26 462 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 NYAP2Q9P242 653 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 IVNS1ABPQ9Y6Y0 642 aa21.49■■□□□ 1.03
HMGN1-219ENST00000491183 ERCC3P19447 782 aa21.48■■□□□ 1.03
HMGN1-219ENST00000491183 SAMD1Q6SPF0 538 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-219ENST00000491183 NACAP1Q9BZK3 213 aa21.48■■□□□ 1.03
HMGN1-219ENST00000491183 LNPKQ9C0E8 428 aa21.48■■□□□ 1.03
HMGN1-219ENST00000491183 OGDHLQ9ULD0 1010 aa21.48■■□□□ 1.03
HMGN1-219ENST00000491183 COL11A1P12107 1806 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-219ENST00000491183 IGHA2P01877 340 aa21.47■■□□□ 1.03
HMGN1-219ENST00000491183 PLS1Q14651 629 aa21.47■■□□□ 1.03
HMGN1-219ENST00000491183 TMEM132BQ14DG7 1078 aa21.47■■□□□ 1.03
HMGN1-219ENST00000491183 HABP4Q5JVS0 413 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms