RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 ZBTB48P10074 688 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 VEGFBP49765 207 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 NT5C2P49902 561 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 BACE1P56817 501 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 MOGSQ13724 837 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 CCL15Q16663 113 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 IFIT1BQ5T764 474 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 DGKHQ86XP1 1220 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 CCDC102AQ96A19 550 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 TBC1D2Q9BYX2 928 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 PDRG1Q9NUG6 133 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 TMX2Q9Y320 296 aa12.64□□□□□ -0.39
CACNA1C-227ENST00000491104 WDR19Q8NEZ3 1342 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 NDUFB10O96000 172 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 GTF2A2P52657 109 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 FGD1P98174 961 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 KIF23Q02241 960 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 SNAPC2Q13487 334 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 TOB2Q14106 344 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 CCDC178Q5BJE1 867 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 TREML2Q5T2D2 321 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 BRI3BPQ8WY22 251 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 BRF1Q92994 677 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 MKL1Q969V6 931 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 NUP88Q99567 741 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
CACNA1C-227ENST00000491104 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 F5H6K3 240 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 CXCL11O14625 94 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 RXRAP19793 462 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 NEK4P51957 841 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 KLRC3Q07444 240 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 SLFN13Q68D06 897 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 TTC14Q96N46 770 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 ISY1Q9ULR0 285 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-227ENST00000491104 MANSC4A6NHS7 340 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 CETPP11597 493 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 VCAM1P19320 739 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 LIFRP42702 1097 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 USP14P54578 494 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 AK2P54819 239 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 GPAT2Q6NUI2 795 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 NUP133Q8WUM0 1156 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 C12orf42Q96LP6 360 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 PTPN18Q99952 460 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 MTA3Q9BTC8 594 aa12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 NAP1L2Q9ULW6 460 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-227ENST00000491104 KLF18A0A0U1RQI7 1052 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 GOLGA8HP0CJ92 632 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 PDHBP11177 359 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 NOGQ13253 232 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 RABEP1Q15276 862 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 MICU3Q86XE3 530 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 CCDC144CPQ8IYA2 1237 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 AGXT2Q9BYV1 514 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 RLFQ13129 1914 aa12.6□□□□□ -0.39
CACNA1C-227ENST00000491104 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 CD2BP2O95400 341 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 SLC1A4P43007 532 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 TTBK2Q6IQ55 1244 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 APOA5Q6Q788 366 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 CATIPQ7Z7H3 387 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms