RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	MAGEF1	Q9HAY2	307 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
FN1-223	ENST00000490833	WWC3	Q9ULE0	1092 aa		7.25	□□□□□ -1.25
FN1-223	ENST00000490833	MINDY4B	A8MYZ0	360 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	LDHB	P07195	334 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	PFKFB1	P16118	471 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	SFPQ	P23246	707 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	ST5	P78524	1137 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	SPAG1	Q07617	926 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	ITPK1	Q13572	414 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	PTPN14	Q15678	1187 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	RRP12	Q5JTH9	1297 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	MCTP2	Q6DN12	878 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	KRBA2	Q6ZNG9	492 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	CYB5R4	Q7L1T6	521 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	DZIP1	Q86YF9	867 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	LRRC8A	Q8IWT6	810 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	DIS3L2	Q8IYB7	885 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	ZNF444	Q8N0Y2	327 aa	Predicted RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	IQUB	Q8NA54	791 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	KIF18A	Q8NI77	898 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	ENOX1	Q8TC92	643 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	SMARCE1	Q969G3	411 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	IQCD	Q96DY2	449 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	RBM17	Q96I25	401 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	NAP1L4	Q99733	375 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	RIOK1	Q9BRS2	568 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	NAA15	Q9BXJ9	866 aa	Known RBP	7.24	□□□□□ -1.25
FN1-223	ENST00000490833	LRRC27	Q9C0I9	530 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	CUEDC2	Q9H467	287 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	SEC31B	Q9NQW1	1179 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	CLIC4	Q9Y696	253 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	XDH	P47989	1333 aa		7.24	□□□□□ -1.25
FN1-223	ENST00000490833	AKAP11	Q9UKA4	1901 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	WNK3	Q9BYP7	1800 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	UQCRHL	A0A096LP55	91 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833		A0A1B0GVL5	298 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	NRG2	O14511	850 aa	Predicted RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	SLC26A4	O43511	780 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	RANBP6	O60518	1105 aa	Known RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	RNF40	O75150	1001 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	SERPINC1	P01008	464 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	UQCRH	P07919	91 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	SLFN14	P0C7P3	912 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	SKIL	P12757	684 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	CDK11B	P21127	795 aa	Known RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	GNA11	P29992	359 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	LONP1	P36776	959 aa	Known RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	TRAF1	Q13077	416 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	STIM1	Q13586	685 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	GRAP	Q13588	217 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	PTPA	Q15257	358 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	SEC23A	Q15436	765 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	TPD52L1	Q16890	204 aa	Predicted RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	ERFE	Q4G0M1	354 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	SYNE4	Q8N205	404 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	LCORL	Q8N3X6	602 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	FLAD1	Q8NFF5	587 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	HELB	Q8NG08	1087 aa	Predicted RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	GRAPL	Q8TC17	118 aa	Predicted RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	BBX	Q8WY36	941 aa	Predicted RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	NSUN4	Q96CB9	384 aa	Known RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	ACSBG1	Q96GR2	724 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	CHAMP1	Q96JM3	812 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	PHF20	Q9BVI0	1012 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	TTC12	Q9H892	705 aa	Predicted RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	KAT14	Q9H8E8	782 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	MKNK2	Q9HBH9	465 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	CCNL1	Q9UK58	526 aa	Predicted RBP	7.23	□□□□□ -1.25
FN1-223	ENST00000490833	DUOX1	Q9NRD9	1551 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	PHLPP1	O60346	1717 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	TNKS	O95271	1327 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	NEDD4	P46934	1319 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	LAMB2	P55268	1798 aa		7.23	□□□□□ -1.25
FN1-223	ENST00000490833	TSPY2	A6NKD2	308 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	SMAP	O00193	183 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	CDC27	P30260	824 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	USP5	P45974	858 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	PLCD1	P51178	756 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	UBASH3A	P57075	661 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	AMPD3	Q01432	767 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	GUCY1B3	Q02153	619 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	CTDSPL2	Q05D32	466 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	TRIM14	Q14142	442 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	POSTN	Q15063	836 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	GRIPAP1	Q4V328	841 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	CTR9	Q6PD62	1173 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	PI16	Q6UXB8	463 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	NBPF11	Q86T75	865 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	DHX40	Q8IX18	779 aa	Known RBP	7.22	□□□□□ -1.25
FN1-223	ENST00000490833	SPC24	Q8NBT2	197 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	NUP133	Q8WUM0	1156 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	RPGR	Q92834	1020 aa	Known RBP	7.22	□□□□□ -1.25
FN1-223	ENST00000490833	CCDC51	Q96ER9	411 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	AK8	Q96MA6	479 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	FEZ1	Q99689	392 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	RAB34	Q9BZG1	259 aa		7.22	□□□□□ -1.25
FN1-223	ENST00000490833	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	7.22	□□□□□ -1.25
FN1-223	ENST00000490833	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.22	□□□□□ -1.25

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