RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 CTCFLQ8NI51 663 aaPredicted RBP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 GBA2Q9HCG7 927 aaPredicted RBP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 TCP11L1Q9NUJ3 509 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 ELP1O95163 1332 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
HDAC3-210ENST00000490808 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 HLA-DOAP06340 250 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 TSPY3P0CV98 308 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 TSPY8P0CW00 308 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 IREB2P48200 963 aaKnown RBP11.89□□□□□ -0.51
HDAC3-210ENST00000490808 GNAQP50148 359 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 SEC23AQ15436 765 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
HDAC3-210ENST00000490808 STK11IPQ8N1F8 1099 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 MAP3K14Q99558 947 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 KAT14Q9H8E8 782 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 SWAP70Q9UH65 585 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
HDAC3-210ENST00000490808 CASP8AP2Q9UKL3 1982 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 TCP10L2B9ZVM9 353 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 ADM5C9JUS6 153 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 TBC1D12O60347 775 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 DEXIO95424 95 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
HDAC3-210ENST00000490808 DNM1Q05193 864 aaKnown RBP11.88□□□□□ -0.51
HDAC3-210ENST00000490808 FMR1Q06787 632 aaKnown RBP eCLIP11.88□□□□□ -0.51
HDAC3-210ENST00000490808 DGKZQ13574 1117 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 SAPCD2Q86UD0 394 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 MAPKAPK5Q8IW41 473 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 FBXO18Q8NFZ0 1043 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 NUP133Q8WUM0 1156 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 ALG1Q9BT22 464 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
HDAC3-210ENST00000490808 INCENPQ9NQS7 918 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
HDAC3-210ENST00000490808 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 HERC5Q9UII4 1024 aaKnown RBP11.88□□□□□ -0.51
HDAC3-210ENST00000490808 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
HDAC3-210ENST00000490808 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 FLT1P17948 1338 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 FIBPO43427 364 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 AOC2O75106 756 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 ADD1P35611 737 aaKnown RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 MAP2K2P36507 400 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 TFAP4Q01664 338 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 MAP3K10Q02779 954 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 RESTQ13127 1097 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 FOXD4L6Q3SYB3 417 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 CST9Q5W186 159 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 FOXD4L3Q6VB84 417 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 C16orf86Q6ZW13 317 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 FERMT3Q86UX7 667 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 FOXP4Q8IVH2 680 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 ENAHQ8N8S7 591 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 ANKS1AQ92625 1134 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 CCDC102AQ96A19 550 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 TEPSINQ96N21 525 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 OSBPL5Q9H0X9 879 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-210ENST00000490808 PI4KBQ9UBF8 816 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 PCDHAC2Q9Y5I4 1007 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 MYH8P13535 1937 aa11.87□□□□□ -0.51
HDAC3-210ENST00000490808 MYH15Q9Y2K3 1946 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 CYP2D7A0A087X1C5 515 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 TRAF5O00463 557 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 PRDM1O75626 825 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 NFIAQ12857 509 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
HDAC3-210ENST00000490808 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
HDAC3-210ENST00000490808 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 CSRNP1Q96S65 589 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 LZTS2Q9BRK4 669 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 TRIM34Q9BYJ4 488 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 ZNF341Q9BYN7 854 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 TMEM39BQ9GZU3 492 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 EHD4Q9H223 541 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 MYH6P13533 1939 aa11.86□□□□□ -0.51
HDAC3-210ENST00000490808 PRPF3O43395 683 aaKnown RBP11.85□□□□□ -0.51
HDAC3-210ENST00000490808 CA12O43570 354 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 FDPSP14324 419 aaKnown RBP11.85□□□□□ -0.51
HDAC3-210ENST00000490808 CDC27P30260 824 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 CDK8P49336 464 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 MRE11P49959 708 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 HUNKP57058 714 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 TTLL12Q14166 644 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-210ENST00000490808 NTRK3Q16288 839 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 LDLRAD1Q5T700 205 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 NBPF12Q5TAG4 269 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-210ENST00000490808 ZSCAN29Q8IWY8 852 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-210ENST00000490808 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-210ENST00000490808 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-210ENST00000490808 NEDD1Q8NHV4 660 aa11.85□□□□□ -0.51
HDAC3-210ENST00000490808 ANP32BQ92688 251 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms