RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 YIPF2Q9BWQ6 316 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 CEP44Q9C0F1 390 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 SUGCTQ9HAC7 445 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 PRDM11Q9NQV5 511 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 TMEM39AQ9NV64 488 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 HIF3AQ9Y2N7 669 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 RGPD8O14715 1765 aaPredicted RBP6.33□□□□□ -1.4
CSTF1-205ENST00000490539 AATKQ6ZMQ8 1374 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 PRPF40AO75400 957 aaKnown RBP6.32□□□□□ -1.4
CSTF1-205ENST00000490539 USP11P51784 963 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 EVA1CP58658 441 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 JMYQ8N9B5 988 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 MYRFLQ96LU7 910 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 UBL7Q96S82 380 aaPredicted RBP6.32□□□□□ -1.4
CSTF1-205ENST00000490539 TMPRSS13Q9BYE2 586 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 KCNF1Q9H3M0 494 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 SPON1Q9HCB6 807 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 FAM8A1Q9UBU6 413 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 RAXQ9Y2V3 346 aa6.32□□□□□ -1.4
CSTF1-205ENST00000490539 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.31□□□□□ -1.4
CSTF1-205ENST00000490539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSTF1-205ENST00000490539 FAM46AQ96IP4 442 aaKnown RBP6.31□□□□□ -1.4
CSTF1-205ENST00000490539 TESK2Q96S53 571 aa6.31□□□□□ -1.4
CSTF1-205ENST00000490539 EMILIN2Q9BXX0 1053 aa6.31□□□□□ -1.4
CSTF1-205ENST00000490539 PPM1HQ9ULR3 514 aa6.31□□□□□ -1.4
CSTF1-205ENST00000490539 USP6P35125 1406 aa6.31□□□□□ -1.4
CSTF1-205ENST00000490539 GOLGB1Q14789 3259 aaKnown RBP6.31□□□□□ -1.4
CSTF1-205ENST00000490539 BRWD3Q6RI45 1802 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 USP32Q8NFA0 1604 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 FAM83GA6ND36 823 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 KCNQ2O43526 872 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 GCP02774 474 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 SLFN14P0C7P3 912 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 HSPA5P11021 654 aaKnown RBP6.3□□□□□ -1.4
CSTF1-205ENST00000490539 BMP3P12645 472 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 EIF4BP23588 611 aaKnown RBP6.3□□□□□ -1.4
CSTF1-205ENST00000490539 SSTR4P31391 388 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 ZNF157P51786 506 aaPredicted RBP6.3□□□□□ -1.4
CSTF1-205ENST00000490539 CLEC10AQ8IUN9 316 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 UNC5CLQ8IV45 518 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 FAM20CQ8IXL6 584 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 GIMAP7Q8NHV1 300 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 COG3Q96JB2 828 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 SLC12A5Q9H2X9 1139 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 C12orf49Q9H741 205 aa6.3□□□□□ -1.4
CSTF1-205ENST00000490539 TTC21BQ7Z4L5 1316 aa6.29□□□□□ -1.4
CSTF1-205ENST00000490539 COL22A1Q8NFW1 1626 aaPredicted RBP6.29□□□□□ -1.4
CSTF1-205ENST00000490539 GNA15P30679 374 aa6.29□□□□□ -1.4
CSTF1-205ENST00000490539 PREPP48147 710 aa6.29□□□□□ -1.4
CSTF1-205ENST00000490539 ZC3H6P61129 1189 aaKnown RBP6.29□□□□□ -1.4
CSTF1-205ENST00000490539 SOX4Q06945 474 aaPredicted RBP6.29□□□□□ -1.4
CSTF1-205ENST00000490539 EDC4Q6P2E9 1401 aaKnown RBP6.29□□□□□ -1.4
CSTF1-205ENST00000490539 BTG4Q9NY30 223 aa6.29□□□□□ -1.4
CSTF1-205ENST00000490539 SUPT16HQ9Y5B9 1047 aaKnown RBP6.29□□□□□ -1.4
CSTF1-205ENST00000490539 CGNL1Q0VF96 1302 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 FSTP19883 344 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 FAAP100Q0VG06 881 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 AKAP4Q5JQC9 854 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 BEND4Q6ZU67 534 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 ARMC10Q8N2F6 343 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 FAM83CQ9BQN1 747 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 TRIM56Q9BRZ2 755 aaKnown RBP6.28□□□□□ -1.4
CSTF1-205ENST00000490539 OSBPL7Q9BZF2 842 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 NRSN2Q9GZP1 204 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 CBX8Q9HC52 389 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 TOPAZ1Q8N9V7 1692 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 ANKRD36BQ8N2N9 1353 aa6.28□□□□□ -1.4
CSTF1-205ENST00000490539 DISP2A7MBM2 1401 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 CPSF1Q10570 1443 aaKnown RBP6.27□□□□□ -1.41
CSTF1-205ENST00000490539 TIAF1O95411 115 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 DLGAP3O95886 979 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 GSTP1P09211 210 aaKnown RBP6.27□□□□□ -1.41
CSTF1-205ENST00000490539 USP17L7P0C7H9 530 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 TAL1P17542 331 aaPredicted RBP6.27□□□□□ -1.41
CSTF1-205ENST00000490539 NME2P22392 152 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 MAP4P27816 1152 aaKnown RBP6.27□□□□□ -1.41
CSTF1-205ENST00000490539 FZD5Q13467 585 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 LRRC14Q15048 493 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 VPS72Q15906 364 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 PAOXQ6QHF9 649 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 DYMQ7RTS9 669 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 SULF2Q8IWU5 870 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 KCNB2Q92953 911 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 SETDB2Q96T68 719 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 DUSP9Q99956 384 aaKnown RBP6.27□□□□□ -1.41
CSTF1-205ENST00000490539 KRT82Q9NSB4 513 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 AP4E1Q9UPM8 1137 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 KNSTRNQ9Y448 316 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 RNF114Q9Y508 228 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 A0A1W2PP64 1363 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 KIAA0232Q92628 1395 aa6.27□□□□□ -1.41
CSTF1-205ENST00000490539 USP19O94966 1318 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 SYNGAP1Q96PV0 1343 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 TRPM3Q9HCF6 1732 aaPredicted RBP6.26□□□□□ -1.41
CSTF1-205ENST00000490539 FAM95CA0A1B0GW59 222 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 AOC2O75106 756 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
CSTF1-205ENST00000490539 ADH5P11766 374 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms