RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 DEPDC7Q96QD5 511 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 PRDM6Q9NQX0 595 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 SNTG2Q9NY99 539 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 REV1Q9UBZ9 1251 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 KLHL3Q9UH77 587 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 MRPL42Q9Y6G3 142 aaKnown RBP7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 PNPLA6Q8IY17 1366 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 A2MP01023 1474 aa7.03□□□□□ -1.28
SSX2IP-208ENST00000490476 DISP2A7MBM2 1401 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 ARHGAP5Q13017 1502 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 FAM221BA6H8Z2 402 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 FAM83GA6ND36 823 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 KCNQ2O43526 872 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 AOC2O75106 756 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 ARHGEF15O94989 841 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 GRK4P32298 578 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 ETF1P62495 437 aaKnown RBP7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 COL9A3Q14050 684 aaPredicted RBP7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 DUOXA2Q1HG44 320 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 EFCAB2Q5VUJ9 269 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 FAM9AQ8IZU1 332 aaPredicted RBP7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 SVOPQ8N4V2 548 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 RBBP8NLQ8NC74 664 aaPredicted RBP7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 MKL1Q969V6 931 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 WDR18Q9BV38 432 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 TBX22Q9Y458 520 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 SAMD9LQ8IVG5 1584 aa7.02□□□□□ -1.29
SSX2IP-208ENST00000490476 PLEKHD1A6NEE1 506 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 TM4SF5O14894 197 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 DDAH1O94760 285 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 PGRP06401 933 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 PDE4BQ07343 736 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 FXNQ16595 210 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 DDR2Q16832 855 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 KIF4BQ2VIQ3 1234 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 LRRFIP1Q32MZ4 808 aaKnown RBP7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 PPM1JQ5JR12 505 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 CYFIP1Q7L576 1253 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 MICAL1Q8TDZ2 1067 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 TMEM40Q8WWA1 233 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 MAPK8IP1Q9UQF2 711 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 HIF3AQ9Y2N7 669 aa7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 GOLGB1Q14789 3259 aaKnown RBP7.01□□□□□ -1.29
SSX2IP-208ENST00000490476 CASZ1Q86V15 1759 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 DGKGP49619 791 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 RAC1P63000 192 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 ID3Q02535 119 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 ZC3H12AQ5D1E8 599 aaKnown RBP7□□□□□ -1.29
SSX2IP-208ENST00000490476 OVOS1Q6IE37 1185 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 ZNF662Q6ZS27 426 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 TTC6Q86TZ1 520 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 NLGN1Q8N2Q7 840 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 TMEM151AQ8N4L1 468 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 PUS7Q96PZ0 661 aaKnown RBP7□□□□□ -1.29
SSX2IP-208ENST00000490476 RUSC1Q9BVN2 902 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 AP4E1Q9UPM8 1137 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 CDC42BPBQ9Y5S2 1711 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 CUL9Q8IWT3 2517 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 ASXL1Q8IXJ9 1541 aa7□□□□□ -1.29
SSX2IP-208ENST00000490476 NCOA2Q15596 1464 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 A0A0A0MRY4 1105 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 A0A1W2PQH9 124 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 ANKRD62A6NC57 917 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 SLC22A31A6NKX4 558 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 B2RBV5 119 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 DNAJA2O60884 412 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 WISP1O95388 367 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 GUCY2CP25092 1073 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 RASSF7Q02833 373 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 IFRD2Q12894 506 aaPredicted RBP6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 RASA3Q14644 834 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 EXOSC6Q5RKV6 272 aaKnown RBP6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 ACAD11Q709F0 780 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 DTWD1Q8N5C7 304 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 JMYQ8N9B5 988 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 DNAJC7Q99615 494 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 TM9SF2Q99805 663 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 LRRC4BQ9NT99 713 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 GMIPQ9P107 970 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 PPP1R9AQ9ULJ8 1098 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 GPATCH8Q9UKJ3 1502 aaKnown RBP6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 PTCH1Q13635 1447 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 MIA2Q96PC5 1412 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 PRR36Q9H6K5 1346 aa6.99□□□□□ -1.29
SSX2IP-208ENST00000490476 CHURC1-FNTBB4DL54 471 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 GJB6O95452 261 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 KCNA6P17658 529 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 CASP7P55210 303 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 CHMP4BP1P59074 171 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 ZYXQ15942 572 aaKnown RBP6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 ARSHQ5FYA8 562 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 NUTM2GQ5VZR2 741 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 C6orf15Q6UXA7 325 aaPredicted RBP6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 NLRC3Q7RTR2 1065 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 FBXO11Q86XK2 927 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 FMR1NBQ8N0W7 255 aaPredicted RBP6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 ATG4CQ96DT6 458 aa6.98□□□□□ -1.29
SSX2IP-208ENST00000490476 WNT10AQ9GZT5 417 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms