RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	SFRP5	Q5T4F7	317 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	CDC37L1	Q7L3B6	337 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	ZNF428	Q96B54	188 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	MRI	Q9BWK5	157 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	FAM8A1	Q9UBU6	413 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	CSAD	Q9Y600	493 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	HRK	O00198	91 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	PRICKLE3	O43900	615 aa	Predicted RBP	4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	EIF4B	P23588	611 aa	Known RBP	4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	VAMP1	P23763	118 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	GSTT1	P30711	240 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	NTF4	P34130	210 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	ZNF252P-AS1	Q0IIN9	211 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	PSMD2	Q13200	908 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	ZNF326	Q5BKZ1	582 aa	Known RBP	4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	OXR1	Q8N573	874 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	CEP44	Q9C0F1	390 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	MBD1	Q9UIS9	605 aa	Predicted RBP	4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	USP31	Q70CQ4	1352 aa		4.14	□□□□□ -1.75
PUM3-204	ENST00000490444	FITM1	A5D6W6	292 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	DCDC2C	A8MYV0	355 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	ENC1	O14682	589 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	FANCG	O15287	622 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	SORBS3	O60504	671 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	TRIM37	O94972	964 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	PDE6B	P35913	854 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	XPC	Q01831	940 aa	Predicted RBP	4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	SNX17	Q15036	470 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	LRRC14	Q15048	493 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	MEI1	Q5TIA1	1274 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	TPTE2	Q6XPS3	522 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	C12orf40	Q86WS4	652 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	LINC01356	Q8N9X3	169 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	KCT2	Q8NC54	265 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	NECAB3	Q96P71	396 aa	Predicted RBP	4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	C19orf44	Q9H6X5	657 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	ZSWIM5	Q9P217	1185 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	PPM1H	Q9ULR3	514 aa		4.13	□□□□□ -1.75
PUM3-204	ENST00000490444	CYR61	O00622	381 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	IRS4	O14654	1257 aa	Predicted RBP	4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	N4BP3	O15049	544 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	LRIG2	O94898	1065 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	RECK	O95980	971 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	SLPI	P03973	132 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	GDF5	P43026	501 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	VMAC	Q2NL98	169 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	CRB2	Q5IJ48	1285 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	RASIP1	Q5U651	963 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	LLGL2	Q6P1M3	1020 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	MPRIP	Q6WCQ1	1025 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	ZNF507	Q8TCN5	953 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	GRIN3A	Q8TCU5	1115 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	ELMO3	Q96BJ8	720 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	CACNA2D2	Q9NY47	1150 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	TPX2	Q9ULW0	747 aa	Known RBP	4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	PCDHA4	Q9UN74	947 aa		4.12	□□□□□ -1.75
PUM3-204	ENST00000490444	FBXO24	O75426	580 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	PAGE1	O75459	146 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	SLITRK5	O94991	958 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	BMP6	P22004	513 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	ST13	P50502	369 aa	Known RBP	4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	RING1	Q06587	406 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	TIGD5	Q53EQ6	642 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	ZBTB37	Q5TC79	503 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	SCARA3	Q6AZY7	606 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	ARMCX6	Q7L4S7	300 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	UBE3D	Q7Z6J8	389 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	COX4I2	Q96KJ9	171 aa		4.11	□□□□□ -1.75
PUM3-204	ENST00000490444	OR14I1	A6ND48	311 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	CELA3A	P09093	270 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	ZGLP1	P0C6A0	271 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	SRSF3	P84103	164 aa	Known RBP	4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	TAF1C	Q15572	869 aa	Predicted RBP	4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	CNKSR3	Q6P9H4	555 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	SV2B	Q7L1I2	683 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	MRRF	Q96E11	262 aa	Known RBP	4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	BACH2	Q9BYV9	841 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	VTI1B	Q9UEU0	232 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	CYP8B1	Q9UNU6	501 aa		4.1	□□□□□ -1.75
PUM3-204	ENST00000490444	PRAMEF27	A3QJZ7	478 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	KIR3DL1	P43629	444 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	EPHB3	P54753	998 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	UBXN11	Q5T124	520 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	ZNF746	Q6NUN9	644 aa	Predicted RBP	4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	ERMP1	Q7Z2K6	904 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	HDX	Q7Z353	690 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	FAM129C	Q86XR2	697 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	PPP1R13L	Q8WUF5	828 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	DHX38	Q92620	1227 aa	Known RBP	4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	NOC4L	Q9BVI4	516 aa	Known RBP	4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	IGSF5	Q9NSI5	407 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	SIRT5	Q9NXA8	310 aa		4.09	□□□□□ -1.75
PUM3-204	ENST00000490444	C6	P13671	934 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	ACVRL1	P37023	503 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	CAP1	Q01518	475 aa		4.08	□□□□□ -1.76
PUM3-204	ENST00000490444	CHRNE	Q04844	493 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms