RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
PDLIM1-203ENST00000490391 RFX7Q2KHR2 1363 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 DNM1LO00429 736 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 PEX10O60683 326 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 ITGB8P26012 769 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 EPHA10Q5JZY3 1008 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 LDHAL6AQ6ZMR3 332 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 G2E3Q7L622 706 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 TRMT44Q8IYL2 757 aaKnown RBP9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 SNIP1Q8TAD8 396 aaKnown RBP9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 NUDT12Q9BQG2 462 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 ASCC2Q9H1I8 757 aaPredicted RBP9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 ATP11BQ9Y2G3 1177 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 PRRC2BQ5JSZ5 2229 aaKnown RBP9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 MAST3O60307 1309 aa9.05□□□□□ -0.96
PDLIM1-203ENST00000490391 DMDP11532 3685 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 CTNND1O60716 968 aaKnown RBP9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 MRE11P49959 708 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 TMEM31Q5JXX7 168 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 MORN1Q5T089 497 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 CCDC30Q5VVM6 783 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 CCDC146Q8IYE0 955 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 LPAR1Q92633 364 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 TIFAQ96CG3 184 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 GAS2L1Q99501 681 aaPredicted RBP9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 TXNRD2Q9NNW7 524 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 CNNM1Q9NRU3 951 aa9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
PDLIM1-203ENST00000490391 ZNF318Q5VUA4 2279 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 EPG5Q9HCE0 2579 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 PLXNA1Q9UIW2 1896 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 RCCD1A6NED2 376 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 GPR37L1O60883 481 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 TRIM60Q495X7 471 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 LMBR1LQ6UX01 489 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 SLC39A5Q6ZMH5 540 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 TSPYL6Q8N831 410 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 P2RX7Q99572 595 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 APBA2Q99767 749 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 PUS3Q9BZE2 481 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 PRDM12Q9H4Q4 367 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 IFT57Q9NWB7 429 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 DDX20Q9UHI6 824 aaKnown RBP9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 CHMP3Q9Y3E7 222 aa9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 ZFHX2Q9C0A1 2572 aaPredicted RBP9.03□□□□□ -0.96
PDLIM1-203ENST00000490391 MYO15AQ9UKN7 3530 aa9.02□□□□□ -0.96
PDLIM1-203ENST00000490391 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 IGHA2P01877 340 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 RGS2P41220 211 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 HMGCS2P54868 508 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 TFF2Q03403 129 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 CCDC85BQ15834 202 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 PUS10Q3MIT2 529 aaKnown RBP9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 C1orf53Q5VUE5 145 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 TRPV1Q8NER1 839 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 IL27Q8NEV9 243 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 LINS1Q8NG48 757 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 PORCNQ9H237 461 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 MYH16Q9H6N6 1097 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 FLRT1Q9NZU1 646 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 LRRFIP2Q9Y608 721 aaKnown RBP9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 ADGRG1Q9Y653 693 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 CACNA1HO95180 2353 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 UTYO14607 1347 aa9.02□□□□□ -0.97
PDLIM1-203ENST00000490391 MYH13Q9UKX3 1938 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 ATAD5Q96QE3 1844 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 DDTLA6NHG4 134 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 WNT7AO00755 349 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 MSCO60682 206 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 RGS3P49796 1198 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 KCNQ1P51787 676 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 SPP2Q13103 211 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 PABPC4Q13310 644 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 CCDC57Q2TAC2 916 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 SH3D19Q5HYK7 790 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 GPR142Q7Z601 462 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 VPS37DQ86XT2 251 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 IRF7Q92985 503 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 IDI2Q9BXS1 227 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 PBX4Q9BYU1 374 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 USP40Q9NVE5 1235 aa9.01□□□□□ -0.97
PDLIM1-203ENST00000490391 DCHS1Q96JQ0 3298 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 FAM86C2PA6NEL3 165 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 KIAA0355O15063 1070 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 ENTPD3O75355 529 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 FRAT2O75474 233 aaPredicted RBP9□□□□□ -0.97
PDLIM1-203ENST00000490391 MAPK4P31152 587 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 GNAI1P63096 354 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 TLE2Q04725 743 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 TRIM26Q12899 539 aaPredicted RBP9□□□□□ -0.97
PDLIM1-203ENST00000490391 Q3C1V9 767 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 GJC2Q5T442 439 aaPredicted RBP9□□□□□ -0.97
PDLIM1-203ENST00000490391 RASIP1Q5U651 963 aa9□□□□□ -0.97
PDLIM1-203ENST00000490391 NPAS3Q8IXF0 933 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms