RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 POTEEQ6S8J3 1075 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 ASCC2Q9H1I8 757 aaPredicted RBP17■□□□□ 0.31
SRGAP3-208ENST00000490348 ZFYVE28Q9HCC9 887 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 TCP11L1Q9NUJ3 509 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 ZSWIM5Q9P217 1185 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 BRCA2P51587 3418 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 CAP1Q01518 475 aa16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 RCSD1Q6JBY9 416 aa16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 LRRC47Q8N1G4 583 aaKnown RBP16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 ZNF296Q8WUU4 475 aaPredicted RBP16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 ESR2Q92731 530 aa16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 RPAP3Q9H6T3 665 aaPredicted RBP16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 MYH4Q9Y623 1939 aa16.99■□□□□ 0.31
SRGAP3-208ENST00000490348 CASP8AP2Q9UKL3 1982 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 C17orf99Q6UX52 265 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 CYB5R4Q7L1T6 521 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 LPAR1Q92633 364 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 ZKSCAN3Q9BRR0 538 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 CPA4Q9UI42 421 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 STX8Q9UNK0 236 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 F5H6K3 240 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 NDUFB10O96000 172 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 KLRC3Q07444 240 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 CATSPERGQ6ZRH7 1159 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 RASGRP2Q7LDG7 609 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 P2RX7Q99572 595 aaKnown RBP16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 KRT23Q9C075 422 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 CNNM2Q9H8M5 875 aa16.98■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L15C9J2P7 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L13C9JLJ4 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L11C9JVI0 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L18D6R9N7 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L22D6RA61 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L17D6RBQ6 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L19D6RCP7 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L20D6RJB6 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 PEX10O60683 326 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 BCRP11274 1271 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 USP17L24Q0WX57 530 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 GMCL1P1Q8NEA9 526 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 NUP88Q99567 741 aaPredicted RBP16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 GOPCQ9HD26 462 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 PNMA3Q9UL41 463 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
SRGAP3-208ENST00000490348 RLFQ13129 1914 aa16.96■□□□□ 0.31
SRGAP3-208ENST00000490348 OSBPP22059 807 aa16.96■□□□□ 0.31
SRGAP3-208ENST00000490348 NT5C2P49902 561 aa16.96■□□□□ 0.31
SRGAP3-208ENST00000490348 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
SRGAP3-208ENST00000490348 TMEM47Q9BQJ4 181 aa16.96■□□□□ 0.31
SRGAP3-208ENST00000490348 WDR46O15213 610 aaKnown RBP16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 RAD21O60216 631 aa16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 ANTXR2P58335 489 aa16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 HERVK_113P62684 666 aa16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 MB21D2Q8IYB1 491 aaPredicted RBP16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 ENAHQ8N8S7 591 aaPredicted RBP16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 TXNRD2Q9NNW7 524 aa16.95■□□□□ 0.3
SRGAP3-208ENST00000490348 FKTNO75072 461 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 REC8O95072 547 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 CTGFP29279 349 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 CHST3Q7LGC8 479 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 ANKRD13CQ8N6S4 541 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 NCOA7Q8NI08 942 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 KCNB2Q92953 911 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 TNKSO95271 1327 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 TOP1P11387 765 aaKnown RBP16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 HSPA4P34932 840 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 SP3Q02447 781 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 TRDNQ13061 729 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 SEC23AQ15436 765 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 TSGA10IPQ3SY00 556 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 DGKHQ86XP1 1220 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 ANKS1AQ92625 1134 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 TTC14Q96N46 770 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 USP26Q9BXU7 913 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 ARHGAP39Q9C0H5 1083 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
SRGAP3-208ENST00000490348 ZSWIM8A7E2V4 1837 aa16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 CNMDO75829 334 aa16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 COL13A1Q5TAT6 717 aaPredicted RBP16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 LBX2Q6XYB7 198 aa16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 CD99L2Q8TCZ2 262 aa16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 GMCL1Q96IK5 515 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms