RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 ATAD5Q96QE3 1844 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 VPS37CA5D8V6 355 aaPredicted RBP15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 PRPF3O43395 683 aaKnown RBP15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 DEXIO95424 95 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 ASNSP08243 561 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 SMARCA1P28370 1054 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 GUCY1A2P33402 732 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 ATP2B2Q01814 1243 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 ASPRV1Q53RT3 343 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 NBPF11Q86T75 865 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 PNMA8AQ86V59 439 aaPredicted RBP15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 SULF1Q8IWU6 871 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 CDAN1Q8IWY9 1227 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 PHKBQ93100 1093 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 ARHGEF10LQ9HCE6 1279 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 ZBTB21Q9ULJ3 1066 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 ATP6V1DQ9Y5K8 247 aa15.39■□□□□ 0.05
HLA-DOA-205ENST00000490305 PALM3A6NDB9 673 aaPredicted RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 CTNND1O60716 968 aaKnown RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 NBPF12Q5TAG4 269 aaPredicted RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 CLEC17AQ6ZS10 378 aa15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 LRRC47Q8N1G4 583 aaKnown RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 C8orf76Q96K31 380 aa15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 ALG1Q9BT22 464 aa15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 MAD2L2Q9UI95 211 aa15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
HLA-DOA-205ENST00000490305 PHF20L1A8MW92 1017 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 DTNBO60941 627 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 F13A1P00488 732 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 PDHBP11177 359 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 XBP1P17861 261 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 FUT2Q10981 343 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 TRIM29Q14134 588 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 GPATCH4Q5T3I0 446 aaKnown RBP15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 SRBD1Q8N5C6 995 aaKnown RBP15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 GMCL1P1Q8NEA9 526 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 DCAF4Q8WV16 495 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 SH2D4AQ9H788 454 aa15.37■□□□□ 0.05
HLA-DOA-205ENST00000490305 KLRF2D3W0D1 207 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 USP48Q86UV5 1035 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 CLEC10AQ8IUN9 316 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 CCDC82Q8N4S0 544 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 SPZ1Q9BXG8 430 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 ZSCAN16Q9H4T2 348 aaPredicted RBP15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 ZNF112Q9UJU3 913 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 MTMR7Q9Y216 660 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 CNTNAP5Q8WYK1 1306 aa15.36■□□□□ 0.05
HLA-DOA-205ENST00000490305 DOCK1Q14185 1865 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 USP17L5A8MUK1 530 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 JAG1P78504 1218 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 FOXD4L5Q5VV16 416 aaPredicted RBP15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 SLFN13Q68D06 897 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 USP17L2Q6R6M4 530 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 CDC37L1Q7L3B6 337 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 SIAH1Q8IUQ4 282 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 STAG2Q8N3U4 1231 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 FOXD4L4Q8WXT5 416 aaPredicted RBP15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 GOPCQ9HD26 462 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 TMX2Q9Y320 296 aa15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 V9GY48 417 aaPredicted RBP15.35■□□□□ 0.05
HLA-DOA-205ENST00000490305 POTECB2RU33 542 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 NF2P35240 595 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 ZNF543Q08ER8 600 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 EAPPQ56P03 285 aaPredicted RBP15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 SCYL3Q8IZE3 742 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 FAM177A1Q8N128 213 aaPredicted RBP15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 GMCL1Q96IK5 515 aa15.34■□□□□ 0.05
HLA-DOA-205ENST00000490305 F5H6K3 240 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 PTMSP20962 102 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 SLC1A4P43007 532 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 FOSBP53539 338 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 KLRC3Q07444 240 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 PFKFB3Q16875 520 aaPredicted RBP15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 CCDC96Q2M329 555 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 RRP36Q96EU6 259 aaKnown RBP15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 WRNIP1Q96S55 665 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 AS3MTQ9HBK9 375 aa15.33■□□□□ 0.04
HLA-DOA-205ENST00000490305 DDX11L8A8MPP1 907 aa15.32■□□□□ 0.04
HLA-DOA-205ENST00000490305 ADM5C9JUS6 153 aa15.32■□□□□ 0.04
HLA-DOA-205ENST00000490305 PPP1R12BO60237 982 aaPredicted RBP15.32■□□□□ 0.04
HLA-DOA-205ENST00000490305 SCG2P13521 617 aa15.32■□□□□ 0.04
HLA-DOA-205ENST00000490305 VEGFAP15692 232 aaPredicted RBP15.32■□□□□ 0.04
HLA-DOA-205ENST00000490305 MCM4P33991 863 aa15.32■□□□□ 0.04
HLA-DOA-205ENST00000490305 GUCY1B3Q02153 619 aa15.32■□□□□ 0.04
HLA-DOA-205ENST00000490305 SAFBQ15424 915 aaKnown RBP eCLIP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms