RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 SH2D4AQ9H788 454 aa19.7■□□□□ 0.74
SFXN5-220ENST00000490056 VCPKMTQ9H867 229 aa19.7■□□□□ 0.74
SFXN5-220ENST00000490056 TNKSO95271 1327 aa19.7■□□□□ 0.74
SFXN5-220ENST00000490056 IFIT3O14879 490 aaKnown RBP19.69■□□□□ 0.74
SFXN5-220ENST00000490056 PRC1O43663 620 aa19.69■□□□□ 0.74
SFXN5-220ENST00000490056 PPP4R3BQ5MIZ7 849 aa19.69■□□□□ 0.74
SFXN5-220ENST00000490056 ENAHQ8N8S7 591 aaPredicted RBP19.69■□□□□ 0.74
SFXN5-220ENST00000490056 PROCA1Q8NCQ7 364 aaPredicted RBP19.69■□□□□ 0.74
SFXN5-220ENST00000490056 C12orf42Q96LP6 360 aa19.69■□□□□ 0.74
SFXN5-220ENST00000490056 TCEANC2Q96MN5 208 aa19.69■□□□□ 0.74
SFXN5-220ENST00000490056 TMEM47Q9BQJ4 181 aa19.69■□□□□ 0.74
SFXN5-220ENST00000490056 LRRC2Q9BYS8 371 aa19.69■□□□□ 0.74
SFXN5-220ENST00000490056 BACH2Q9BYV9 841 aa19.69■□□□□ 0.74
SFXN5-220ENST00000490056 GPHNQ9NQX3 736 aaPredicted RBP19.69■□□□□ 0.74
SFXN5-220ENST00000490056 LOC285556D6RIA3 1793 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 F5H6K3 240 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 TOP1P11387 765 aaKnown RBP19.68■□□□□ 0.74
SFXN5-220ENST00000490056 MCM5P33992 734 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 KLRC3Q07444 240 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 SEC23AQ15436 765 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 CCDC178Q5BJE1 867 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 ANKRD23Q86SG2 305 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 DGKHQ86XP1 1220 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 REM2Q8IYK8 340 aaPredicted RBP19.68■□□□□ 0.74
SFXN5-220ENST00000490056 TTC14Q96N46 770 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 SENP2Q9HC62 589 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 GOPCQ9HD26 462 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 AGTPBP1Q9UPW5 1226 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 MTMR7Q9Y216 660 aa19.68■□□□□ 0.74
SFXN5-220ENST00000490056 PDHXO00330 501 aa19.67■□□□□ 0.74
SFXN5-220ENST00000490056 NDUFB10O96000 172 aa19.67■□□□□ 0.74
SFXN5-220ENST00000490056 VCAM1P19320 739 aa19.67■□□□□ 0.74
SFXN5-220ENST00000490056 EXOSC10Q01780 885 aaKnown RBP19.67■□□□□ 0.74
SFXN5-220ENST00000490056 TMEM67Q5HYA8 995 aa19.67■□□□□ 0.74
SFXN5-220ENST00000490056 JMYQ8N9B5 988 aa19.67■□□□□ 0.74
SFXN5-220ENST00000490056 IGDCC4Q8TDY8 1250 aa19.67■□□□□ 0.74
SFXN5-220ENST00000490056 ANKS1AQ92625 1134 aa19.67■□□□□ 0.74
SFXN5-220ENST00000490056 NUP88Q99567 741 aaPredicted RBP19.67■□□□□ 0.74
SFXN5-220ENST00000490056 CASTP20810 708 aaKnown RBP19.66■□□□□ 0.74
SFXN5-220ENST00000490056 MAP2K1Q02750 393 aaPredicted RBP19.66■□□□□ 0.74
SFXN5-220ENST00000490056 SLFN13Q68D06 897 aa19.66■□□□□ 0.74
SFXN5-220ENST00000490056 DHX32Q7L7V1 743 aaKnown RBP19.66■□□□□ 0.74
SFXN5-220ENST00000490056 RASGRP2Q7LDG7 609 aa19.66■□□□□ 0.74
SFXN5-220ENST00000490056 RPAP3Q9H6T3 665 aaPredicted RBP19.66■□□□□ 0.74
SFXN5-220ENST00000490056 RNF186Q9NXI6 227 aa19.66■□□□□ 0.74
SFXN5-220ENST00000490056 CEP350Q5VT06 3117 aa19.66■□□□□ 0.74
SFXN5-220ENST00000490056 ERICH2A1L162 156 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 TRPA1O75762 1119 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 PSMA5P28066 241 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 WTAPQ15007 396 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 SART3Q15020 963 aaKnown RBP19.65■□□□□ 0.74
SFXN5-220ENST00000490056 FAM83BQ5T0W9 1011 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 IFIT1BQ5T764 474 aaKnown RBP19.65■□□□□ 0.74
SFXN5-220ENST00000490056 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 BLOC1S2Q6QNY1 142 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 GMCL1P1Q8NEA9 526 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 LPAR1Q92633 364 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 KAT14Q9H8E8 782 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 WBP1LQ9NX94 342 aa19.65■□□□□ 0.74
SFXN5-220ENST00000490056 SH2B2O14492 632 aaPredicted RBP19.64■□□□□ 0.73
SFXN5-220ENST00000490056 CYP2C8P10632 490 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 ANAPC15P60006 121 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 TAF1CQ15572 869 aaPredicted RBP19.64■□□□□ 0.73
SFXN5-220ENST00000490056 PNMA1Q8ND90 353 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 TMEM87BQ96K49 555 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 C22orf23Q9BZE7 217 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 UPF3BQ9BZI7 483 aaKnown RBP19.64■□□□□ 0.73
SFXN5-220ENST00000490056 ASCC2Q9H1I8 757 aaPredicted RBP19.64■□□□□ 0.73
SFXN5-220ENST00000490056 R3HDMLQ9H3Y0 253 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 LY9Q9HBG7 655 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 SYNPO2Q9UMS6 1093 aa19.64■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L15C9J2P7 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L13C9JLJ4 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L11C9JVI0 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L18D6R9N7 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L22D6RA61 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L17D6RBQ6 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L19D6RCP7 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L20D6RJB6 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 WDR46O15213 610 aaKnown RBP19.63■□□□□ 0.73
SFXN5-220ENST00000490056 TBC1D8O95759 1140 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 HMGB1P09429 215 aaKnown RBP19.63■□□□□ 0.73
SFXN5-220ENST00000490056 RPS6KB1P23443 525 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 HOXA7P31268 230 aaPredicted RBP19.63■□□□□ 0.73
SFXN5-220ENST00000490056 USP17L24Q0WX57 530 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 CATSPERGQ6ZRH7 1159 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
SFXN5-220ENST00000490056 TM6SF1Q9BZW5 370 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 TANGO6Q9C0B7 1094 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 ZSWIM6Q9HCJ5 1215 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 SLC45A1Q9Y2W3 748 aa19.63■□□□□ 0.73
SFXN5-220ENST00000490056 WDR19Q8NEZ3 1342 aa19.62■□□□□ 0.73
SFXN5-220ENST00000490056 ALDH1A1P00352 501 aa19.62■□□□□ 0.73
SFXN5-220ENST00000490056 PABPC4Q13310 644 aaKnown RBP eCLIP19.62■□□□□ 0.73
SFXN5-220ENST00000490056 SAMD1Q6SPF0 538 aaPredicted RBP19.62■□□□□ 0.73
SFXN5-220ENST00000490056 RUFY3Q7L099 469 aa19.62■□□□□ 0.73
SFXN5-220ENST00000490056 MTA3Q9BTC8 594 aa19.62■□□□□ 0.73
SFXN5-220ENST00000490056 BEGAINQ9BUH8 593 aa19.62■□□□□ 0.73
SFXN5-220ENST00000490056 UPF2Q9HAU5 1272 aaKnown RBP19.62■□□□□ 0.73
SFXN5-220ENST00000490056 ZCCHC17Q9NP64 241 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms