RNA–Protein interactions for RNA: ENST00000490033.5

C2orf88-208, Transcript of chromosome 2 open reading frame 88, human

TSL 3

Gene C2orf88, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C2orf88-208	ENST00000490033	CERS3	Q8IU89	383 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	RAVER1	Q8IY67	606 aa	Known RBP	4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	CCDC144CP	Q8IYA2	1237 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	AFAP1L2	Q8N4X5	818 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	BVES	Q8NE79	360 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	ATL2	Q8NHH9	583 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	UBASH3B	Q8TF42	649 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	CYB5D2	Q8WUJ1	264 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	OSBP2	Q969R2	916 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	FANCD2OS	Q96PS1	177 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	PRDM6	Q9NQX0	595 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	GABBR1	Q9UBS5	961 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	TCEAL9	Q9UHQ7	104 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	WASHC2C	Q9Y4E1	1318 aa		4.39	□□□□□ -1.71
C2orf88-208	ENST00000490033	CCDC194	A0A1B0GVG4	234 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	FAM83G	A6ND36	823 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	SPDYE3	A6NKU9	549 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	TBX1	O43435	398 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	PPM1B	O75688	479 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	ALDH1L1	O75891	902 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	EYA4	O95677	639 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	CST3	P01034	146 aa	Predicted RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	NEFM	P07197	916 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	CAP2	P40123	477 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	SRSF11	Q05519	484 aa	Known RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	COL9A3	Q14050	684 aa	Predicted RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	MAP7	Q14244	749 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	TTLL4	Q14679	1199 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	ANKRD39	Q53RE8	183 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	RNFT1	Q5M7Z0	435 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	PRAMEF13	Q5VWM6	474 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	DDX46	Q7L014	1031 aa	Known RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	STRA8	Q7Z7C7	330 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	KCT2	Q8NC54	265 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	GALNT6	Q8NCL4	622 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	EDARADD	Q8WWZ3	215 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	DDX1	Q92499	740 aa	Known RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	ACD	Q96AP0	544 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	BTBD6	Q96KE9	485 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	COL25A1	Q9BXS0	654 aa	Predicted RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	TMPRSS13	Q9BYE2	586 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	GBP3	Q9H0R5	595 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	ATXN3L	Q9H3M9	355 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	NXF1	Q9UBU9	619 aa	Known RBP	4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	ZNF451	Q9Y4E5	1061 aa		4.38	□□□□□ -1.71
C2orf88-208	ENST00000490033	MEGF11	A6BM72	1044 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	DNAJC8	O75937	253 aa	Predicted RBP	4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	C6orf222	P0C671	652 aa	Predicted RBP	4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	NID1	P14543	1247 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	CD247	P20963	164 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	GUCY2F	P51841	1108 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	DUOXA2	Q1HG44	320 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	TRIM61	Q5EBN2	209 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	PPM1K	Q8N3J5	372 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	RIN3	Q8TB24	985 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	SLC7A14	Q8TBB6	771 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	LEO1	Q8WVC0	666 aa	Predicted RBP	4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	ISL2	Q96A47	359 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	MRGPRX3	Q96LB0	322 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	MKRN2	Q9H000	416 aa	Known RBP	4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	TRIM39	Q9HCM9	518 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	SFMBT1	Q9UHJ3	866 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	AP4E1	Q9UPM8	1137 aa		4.37	□□□□□ -1.71
C2orf88-208	ENST00000490033	NOP56	O00567	594 aa	Known RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	RNGTT	O60942	597 aa	Known RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	ADH5	P11766	374 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	CPE	P16870	476 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	POU3F2	P20265	443 aa	Predicted RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	EPHB1	P54762	984 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	TBX4	P57082	545 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	STRN3	Q13033	797 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	AUH	Q13825	339 aa	Known RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	TTF1	Q15361	905 aa	Predicted RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	NUTM2G	Q5VZR2	741 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	TRIM59	Q8IWR1	403 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	C7orf61	Q8IZ16	206 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	AHI1	Q8N157	1196 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	DTWD1	Q8N5C7	304 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	GSTCD	Q8NEC7	633 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	DCAF11	Q8TEB1	546 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	XAGE3	Q8WTP9	111 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	PPP1R13L	Q8WUF5	828 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	TSR2	Q969E8	191 aa	Known RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	RCC1L	Q96I51	464 aa	Known RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	CCDC136	Q96JN2	1154 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	FOXQ1	Q9C009	403 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	SLC52A2	Q9HAB3	445 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	GP6	Q9HCN6	339 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	CYP4F12	Q9HCS2	524 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	WHRN	Q9P202	907 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	NDOR1	Q9UHB4	597 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	AKT3	Q9Y243	479 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	EMC9	Q9Y3B6	208 aa		4.36	□□□□□ -1.71
C2orf88-208	ENST00000490033	BLACE	A4D250	179 aa		4.35	□□□□□ -1.71
C2orf88-208	ENST00000490033	SHISA8	B8ZZ34	492 aa		4.35	□□□□□ -1.71
C2orf88-208	ENST00000490033		H3BM21	787 aa		4.35	□□□□□ -1.71
C2orf88-208	ENST00000490033	DLL1	O00548	723 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms