RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 VCPKMTQ9H867 229 aa21.27■■□□□ 1
ABCF3-217ENST00000489719 HELLSQ9NRZ9 838 aa21.27■■□□□ 1
ABCF3-217ENST00000489719 NAV1Q8NEY1 1877 aa21.26■□□□□ 0.99
ABCF3-217ENST00000489719 RASA1P20936 1047 aa21.26■□□□□ 0.99
ABCF3-217ENST00000489719 PDE4BQ07343 736 aa21.26■□□□□ 0.99
ABCF3-217ENST00000489719 LBX2Q6XYB7 198 aa21.26■□□□□ 0.99
ABCF3-217ENST00000489719 SPICE1Q8N0Z3 855 aa21.26■□□□□ 0.99
ABCF3-217ENST00000489719 LOC285556D6RIA3 1793 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 RAD21O60216 631 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 INHAP05111 366 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 CYP2B6P20813 491 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 IRX6P78412 446 aaPredicted RBP21.25■□□□□ 0.99
ABCF3-217ENST00000489719 POTEEQ6S8J3 1075 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 PLEKHH3Q7Z736 793 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 PLEKHM2Q8IWE5 1019 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 GOPCQ9HD26 462 aa21.25■□□□□ 0.99
ABCF3-217ENST00000489719 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
ABCF3-217ENST00000489719 PRDM1O75626 825 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 CNMDO75829 334 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 GJB1P08034 283 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 MCMDC2Q4G0Z9 681 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 KIAA1755Q5JYT7 1200 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 WDR78Q5VTH9 848 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 SOCS4Q8WXH5 440 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.24■□□□□ 0.99
ABCF3-217ENST00000489719 PORCNQ9H237 461 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 OSBPL3Q9H4L5 887 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 ZSWIM8A7E2V4 1837 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 HTTP42858 3142 aa21.24■□□□□ 0.99
ABCF3-217ENST00000489719 DDX60LQ5H9U9 1706 aaKnown RBP21.24■□□□□ 0.99
ABCF3-217ENST00000489719 WDR46O15213 610 aaKnown RBP21.23■□□□□ 0.99
ABCF3-217ENST00000489719 FLOT1O75955 427 aa21.23■□□□□ 0.99
ABCF3-217ENST00000489719 PPARAQ07869 468 aa21.23■□□□□ 0.99
ABCF3-217ENST00000489719 SAMD1Q6SPF0 538 aaPredicted RBP21.23■□□□□ 0.99
ABCF3-217ENST00000489719 GPR142Q7Z601 462 aa21.23■□□□□ 0.99
ABCF3-217ENST00000489719 UNC93B1Q9H1C4 597 aa21.23■□□□□ 0.99
ABCF3-217ENST00000489719 BTBD7Q9P203 1132 aa21.23■□□□□ 0.99
ABCF3-217ENST00000489719 NYAP2Q9P242 653 aa21.23■□□□□ 0.99
ABCF3-217ENST00000489719 XRCC5P13010 732 aaKnown RBP21.22■□□□□ 0.99
ABCF3-217ENST00000489719 DSG3P32926 999 aa21.22■□□□□ 0.99
ABCF3-217ENST00000489719 TRMT44Q8IYL2 757 aaKnown RBP21.22■□□□□ 0.99
ABCF3-217ENST00000489719 MB21D1Q8N884 522 aa21.22■□□□□ 0.99
ABCF3-217ENST00000489719 FAM227BQ96M60 508 aa21.22■□□□□ 0.99
ABCF3-217ENST00000489719 CLIP2Q9UDT6 1046 aa21.22■□□□□ 0.99
ABCF3-217ENST00000489719 IVNS1ABPQ9Y6Y0 642 aa21.22■□□□□ 0.99
ABCF3-217ENST00000489719 ROBO3Q96MS0 1386 aa21.22■□□□□ 0.99
ABCF3-217ENST00000489719 HMGCRP04035 888 aa21.21■□□□□ 0.99
ABCF3-217ENST00000489719 TSPY3P0CV98 308 aa21.21■□□□□ 0.99
ABCF3-217ENST00000489719 TSPY8P0CW00 308 aa21.21■□□□□ 0.99
ABCF3-217ENST00000489719 RGS2P41220 211 aa21.21■□□□□ 0.99
ABCF3-217ENST00000489719 GJA8P48165 433 aa21.21■□□□□ 0.99
ABCF3-217ENST00000489719 TFAP4Q01664 338 aa21.2■□□□□ 0.98
ABCF3-217ENST00000489719 ALX1Q15699 326 aa21.2■□□□□ 0.98
ABCF3-217ENST00000489719 MORN1Q5T089 497 aa21.2■□□□□ 0.98
ABCF3-217ENST00000489719 MYH7P12883 1935 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 A0A0D9SFI3 127 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 SLC15A5A6NIM6 579 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 F5H6K3 240 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 SGPL1O95470 568 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 TFRCP02786 760 aaKnown RBP21.19■□□□□ 0.98
ABCF3-217ENST00000489719 CAPN2P17655 700 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 SDSP20132 328 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 MFAP1P55081 439 aaKnown RBP21.19■□□□□ 0.98
ABCF3-217ENST00000489719 KLRC3Q07444 240 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 NMIQ13287 307 aaPredicted RBP21.19■□□□□ 0.98
ABCF3-217ENST00000489719 PLS1Q14651 629 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 FAM47AQ5JRC9 791 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 VPS53Q5VIR6 699 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 NEDD1Q8NHV4 660 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 SPATC1LQ9H0A9 340 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 HMX1Q9NP08 348 aaPredicted RBP21.19■□□□□ 0.98
ABCF3-217ENST00000489719 MTMR4Q9NYA4 1195 aa21.19■□□□□ 0.98
ABCF3-217ENST00000489719 BAZ2AQ9UIF9 1905 aaKnown RBP21.19■□□□□ 0.98
ABCF3-217ENST00000489719 TTLL1O95922 423 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 PTPREP23469 700 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 CTDSPL2Q05D32 466 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 MAP2K5Q13163 448 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 U2AF1L4Q8WU68 220 aaKnown RBP21.18■□□□□ 0.98
ABCF3-217ENST00000489719 USP6NLQ92738 828 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 MKL1Q969V6 931 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 ATG4CQ96DT6 458 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 DEFB118Q96PH6 123 aa21.18■□□□□ 0.98
ABCF3-217ENST00000489719 MOV10L1Q9BXT6 1211 aaKnown RBP21.18■□□□□ 0.98
ABCF3-217ENST00000489719 IGKV6D-41A0A0C4DH26 115 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 STRNO43815 780 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 FGAP02671 866 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
ABCF3-217ENST00000489719 PPP4R3BQ5MIZ7 849 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 FAM83BQ5T0W9 1011 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 CEP95Q96GE4 821 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 ANAPC4Q9UJX5 808 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 RPTORQ8N122 1335 aa21.17■□□□□ 0.98
ABCF3-217ENST00000489719 TSPY2A6NKD2 308 aa21.16■□□□□ 0.98
ABCF3-217ENST00000489719 HIP1O00291 1037 aa21.16■□□□□ 0.98
ABCF3-217ENST00000489719 FOXP2O15409 715 aa21.16■□□□□ 0.98
ABCF3-217ENST00000489719 HSPD1P10809 573 aaKnown RBP21.16■□□□□ 0.98
ABCF3-217ENST00000489719 SHCBP1Q8NEM2 672 aa21.16■□□□□ 0.98
ABCF3-217ENST00000489719 TRIB2Q92519 343 aa21.16■□□□□ 0.98
ABCF3-217ENST00000489719 MROH8Q9H579 483 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms