RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ARHGEF10LQ9HCE6 1279 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 NYAP2Q9P242 653 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 TMX2Q9Y320 296 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 THSD7BQ9C0I4 1608 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 C19orf81C9J6K1 198 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 F5H6K3 240 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 PDHXO00330 501 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 PEX10O60683 326 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 TBC1D8O95759 1140 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 NDUFB10O96000 172 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 CYP2C8P10632 490 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 VCAM1P19320 739 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 KLRC3Q07444 240 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 SREBF2Q12772 1141 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 FASTKD5Q7L8L6 764 aaKnown RBP9.76□□□□□ -0.85
SF1-218ENST00000489544 TNS4Q8IZW8 715 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 ENAHQ8N8S7 591 aaPredicted RBP9.76□□□□□ -0.85
SF1-218ENST00000489544 JAKMIP1Q96N16 626 aaKnown RBP9.76□□□□□ -0.85
SF1-218ENST00000489544 NEK1Q96PY6 1258 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 TMEM47Q9BQJ4 181 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 VCPKMTQ9H867 229 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 WBP1LQ9NX94 342 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 RNF186Q9NXI6 227 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 TMOD4Q9NZQ9 345 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 TNKSO95271 1327 aa9.76□□□□□ -0.85
SF1-218ENST00000489544 IFIT3O14879 490 aaKnown RBP9.75□□□□□ -0.85
SF1-218ENST00000489544 PRC1O43663 620 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
SF1-218ENST00000489544 ZKSCAN1P17029 563 aaPredicted RBP9.75□□□□□ -0.85
SF1-218ENST00000489544 NOVP48745 357 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 INHBEP58166 350 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 CRHR2Q13324 411 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 SEC23AQ15436 765 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 TSGA10IPQ3SY00 556 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 FAM83BQ5T0W9 1011 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
SF1-218ENST00000489544 ANKRD23Q86SG2 305 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 IQCA1Q86XH1 822 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 PROCA1Q8NCQ7 364 aaPredicted RBP9.75□□□□□ -0.85
SF1-218ENST00000489544 MKL1Q969V6 931 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 C12orf42Q96LP6 360 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 UBAC1Q9BSL1 405 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 RPAP3Q9H6T3 665 aaPredicted RBP9.75□□□□□ -0.85
SF1-218ENST00000489544 FBXO28Q9NVF7 368 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 AGTPBP1Q9UPW5 1226 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 PTPRFP10586 1907 aa9.75□□□□□ -0.85
SF1-218ENST00000489544 TOP1P11387 765 aaKnown RBP9.74□□□□□ -0.85
SF1-218ENST00000489544 MCCP23508 829 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 MCM5P33992 734 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 USP14P54578 494 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 MAP2K1Q02750 393 aaPredicted RBP9.74□□□□□ -0.85
SF1-218ENST00000489544 TAF1CQ15572 869 aaPredicted RBP9.74□□□□□ -0.85
SF1-218ENST00000489544 TMEM67Q5HYA8 995 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 SLFN13Q68D06 897 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 POTEEQ6S8J3 1075 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 RAB11FIP4Q86YS3 637 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 IGDCC4Q8TDY8 1250 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 P2RX7Q99572 595 aaKnown RBP9.74□□□□□ -0.85
SF1-218ENST00000489544 UPF3BQ9BZI7 483 aaKnown RBP9.74□□□□□ -0.85
SF1-218ENST00000489544 ASCC2Q9H1I8 757 aaPredicted RBP9.74□□□□□ -0.85
SF1-218ENST00000489544 SH2D4AQ9H788 454 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
SF1-218ENST00000489544 ISY1Q9ULR0 285 aaKnown RBP9.74□□□□□ -0.85
SF1-218ENST00000489544 SH2B2O14492 632 aaPredicted RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 FOXN1O15353 648 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 EPB41L2O43491 1005 aaKnown RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 CASTP20810 708 aaKnown RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 EXOSC10Q01780 885 aaKnown RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 KRT32Q14532 448 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 IFIT1BQ5T764 474 aaKnown RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 TTBK2Q6IQ55 1244 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 CATSPERGQ6ZRH7 1159 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 KCTD1Q719H9 257 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 DHX32Q7L7V1 743 aaKnown RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 DGKHQ86XP1 1220 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 GMCL1P1Q8NEA9 526 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 ANKS1AQ92625 1134 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 LARP6Q9BRS8 491 aaKnown RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 MYL10Q9BUA6 226 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 BEGAINQ9BUH8 593 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 BACH2Q9BYV9 841 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 TANGO6Q9C0B7 1094 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 CPVLQ9H3G5 476 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 LY9Q9HBG7 655 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 CPA4Q9UI42 421 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 FRMPD2Q68DX3 1309 aaPredicted RBP9.73□□□□□ -0.85
SF1-218ENST00000489544 LOC285556D6RIA3 1793 aa9.73□□□□□ -0.85
SF1-218ENST00000489544 USP17L15C9J2P7 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L13C9JLJ4 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L11C9JVI0 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L18D6R9N7 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L22D6RA61 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L17D6RBQ6 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L19D6RCP7 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L20D6RJB6 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 WDR46O15213 610 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms