RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 RASGRP2Q7LDG7 609 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 CHMP4CQ96CF2 233 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 CFHR5Q9BXR6 569 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 KRT23Q9C075 422 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
HLA-F-229ENST00000489502 RPAP3Q9H6T3 665 aaPredicted RBP17.01■□□□□ 0.31
HLA-F-229ENST00000489502 CNNM2Q9H8M5 875 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 ZFYVE28Q9HCC9 887 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 REC8O95072 547 aa17■□□□□ 0.31
HLA-F-229ENST00000489502 IRX3P78415 501 aaPredicted RBP17■□□□□ 0.31
HLA-F-229ENST00000489502 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
HLA-F-229ENST00000489502 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
HLA-F-229ENST00000489502 SMCR8Q8TEV9 937 aaPredicted RBP17■□□□□ 0.31
HLA-F-229ENST00000489502 NUP88Q99567 741 aaPredicted RBP17■□□□□ 0.31
HLA-F-229ENST00000489502 GOPCQ9HD26 462 aa17■□□□□ 0.31
HLA-F-229ENST00000489502 CPA4Q9UI42 421 aa17■□□□□ 0.31
HLA-F-229ENST00000489502 SLC45A1Q9Y2W3 748 aa17■□□□□ 0.31
HLA-F-229ENST00000489502 NDUFB10O96000 172 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 TRDNQ13061 729 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.31
HLA-F-229ENST00000489502 COL9A3Q14050 684 aaPredicted RBP16.99■□□□□ 0.31
HLA-F-229ENST00000489502 LPAR1Q92633 364 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 TANGO6Q9C0B7 1094 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 PNMA3Q9UL41 463 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 RLFQ13129 1914 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 A0A0G2JMZ2 1700 aa16.99■□□□□ 0.31
HLA-F-229ENST00000489502 GPR25O00155 361 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 TLR2O60603 784 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 OSBPP22059 807 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 NCOA7Q8NI08 942 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 TCP11L1Q9NUJ3 509 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 ZSWIM5Q9P217 1185 aa16.98■□□□□ 0.31
HLA-F-229ENST00000489502 TNKSO95271 1327 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L15C9J2P7 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L13C9JLJ4 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L11C9JVI0 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L18D6R9N7 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L22D6RA61 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L17D6RBQ6 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L19D6RCP7 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L20D6RJB6 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 F5H6K3 240 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 WDR46O15213 610 aaKnown RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 PEX10O60683 326 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 ECM2O94769 699 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 HOXA7P31268 230 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 KLRC3Q07444 240 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 USP17L24Q0WX57 530 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 RNF20Q5VTR2 975 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 CHST3Q7LGC8 479 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 MB21D2Q8IYB1 491 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 ZNF296Q8WUU4 475 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 MKL1Q969V6 931 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 ZSCAN10Q96SZ4 725 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 P2RX7Q99572 595 aaKnown RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
HLA-F-229ENST00000489502 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
HLA-F-229ENST00000489502 TOP1P11387 765 aaKnown RBP16.96■□□□□ 0.31
HLA-F-229ENST00000489502 NOVP48745 357 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 ANTXR2P58335 489 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 HERVK_113P62684 666 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 PPP4R3BQ5MIZ7 849 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 SLFN13Q68D06 897 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 CATSPERGQ6ZRH7 1159 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 ENAHQ8N8S7 591 aaPredicted RBP16.96■□□□□ 0.31
HLA-F-229ENST00000489502 GMCL1P1Q8NEA9 526 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 TMEM47Q9BQJ4 181 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 FBXO28Q9NVF7 368 aa16.96■□□□□ 0.31
HLA-F-229ENST00000489502 SPDYE16A6NNV3 312 aaPredicted RBP16.95■□□□□ 0.3
HLA-F-229ENST00000489502 FLOT1O75955 427 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 BCRP11274 1271 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 HSPA4P34932 840 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 NT5C2P49902 561 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 C8orf34Q49A92 452 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 C17orf99Q6UX52 265 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 ANKRD13CQ8N6S4 541 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 SYNPO2Q9UMS6 1093 aa16.95■□□□□ 0.3
HLA-F-229ENST00000489502 COL11A1P12107 1806 aaPredicted RBP16.95■□□□□ 0.3
HLA-F-229ENST00000489502 FKTNO75072 461 aa16.94■□□□□ 0.3
HLA-F-229ENST00000489502 CAP1Q01518 475 aa16.94■□□□□ 0.3
HLA-F-229ENST00000489502 CCDC96Q2M329 555 aa16.94■□□□□ 0.3
HLA-F-229ENST00000489502 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
HLA-F-229ENST00000489502 POTEEQ6S8J3 1075 aa16.94■□□□□ 0.3
HLA-F-229ENST00000489502 CD99L2Q8TCZ2 262 aa16.94■□□□□ 0.3
HLA-F-229ENST00000489502 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
HLA-F-229ENST00000489502 MGAMO43451 1857 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
HLA-F-229ENST00000489502 PRC1O43663 620 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
HLA-F-229ENST00000489502 MCCP23508 829 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 SP3Q02447 781 aa16.93■□□□□ 0.3
HLA-F-229ENST00000489502 SEC23AQ15436 765 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms