RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 WDHD1O75717 1129 aaPredicted RBP20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 POLD1P28340 1107 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 NTRK3Q16288 839 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 RTN1Q16799 776 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 UPF1Q92900 1129 aaKnown RBP eCLIP20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 TEKT1Q969V4 418 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 IL17RBQ9NRM6 502 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 CLEC10AQ8IUN9 316 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 C8orf76Q96K31 380 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 MTFR1LQ9H019 292 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 PAXBP1Q9Y5B6 917 aa20.86■□□□□ 0.93
POLR2J3-205ENST00000489144 PLEKHA8P1O95397 391 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 SLF2Q8IX21 1173 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 MNS1Q8NEH6 495 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 FGRP09769 529 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 AMOTL1Q8IY63 956 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 SYAP1Q96A49 352 aaPredicted RBP20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 FAM163AQ96GL9 167 aaPredicted RBP20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 DRC1Q96MC2 740 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 ALG1Q9BT22 464 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 KCNF1Q9H3M0 494 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 CXorf56Q9H5V9 222 aa20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 SCAF8Q9UPN6 1271 aaKnown RBP20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.85■□□□□ 0.93
POLR2J3-205ENST00000489144 IRF6O14896 467 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 IARSP41252 1262 aaKnown RBP20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 STRIP1Q5VSL9 837 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 TTC6Q86TZ1 520 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 CCDC112Q8NEF3 446 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 KIF28PB7ZC32 967 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 ORC4O43929 436 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 CDK8P49336 464 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 CCDC125Q86Z20 511 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 FANCBQ8NB91 859 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 MED4Q9NPJ6 270 aa20.84■□□□□ 0.93
POLR2J3-205ENST00000489144 TSPY3P0CV98 308 aa20.83■□□□□ 0.93
POLR2J3-205ENST00000489144 TSPY8P0CW00 308 aa20.83■□□□□ 0.93
POLR2J3-205ENST00000489144 EIF6P56537 245 aaKnown RBP20.83■□□□□ 0.93
POLR2J3-205ENST00000489144 PIM2Q9P1W9 311 aa20.83■□□□□ 0.93
POLR2J3-205ENST00000489144 STX8Q9UNK0 236 aa20.83■□□□□ 0.93
POLR2J3-205ENST00000489144 BCS1LQ9Y276 419 aa20.83■□□□□ 0.93
POLR2J3-205ENST00000489144 ATP2B1P20020 1258 aa20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 RASA1P20936 1047 aa20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 MAP2K1Q02750 393 aaPredicted RBP20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 SHROOM1Q2M3G4 852 aaPredicted RBP20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 RCSD1Q6JBY9 416 aa20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 KRBA2Q6ZNG9 492 aa20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 PLCD4Q9BRC7 762 aa20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 ATP6V1DQ9Y5K8 247 aa20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 MYH1P12882 1939 aa20.83■□□□□ 0.92
POLR2J3-205ENST00000489144 PSMD14O00487 310 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 PLCG2P16885 1265 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 TEX35Q5T0J7 233 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 NLGN2Q8NFZ4 835 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 TDRD3Q9H7E2 651 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 LCMT1Q9UIC8 334 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 BMS1Q14692 1282 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 CCDC91Q7Z6B0 441 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 ZNF444Q8N0Y2 327 aaPredicted RBP20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 RNF217Q8TC41 542 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 DEF6Q9H4E7 631 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 CWC15Q9P013 229 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 SUFUQ9UMX1 484 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 KCNJ14Q9UNX9 436 aa20.82■□□□□ 0.92
POLR2J3-205ENST00000489144 DDX60LQ5H9U9 1706 aaKnown RBP20.81■□□□□ 0.92
POLR2J3-205ENST00000489144 CATIPQ7Z7H3 387 aa20.81■□□□□ 0.92
POLR2J3-205ENST00000489144 SHTN1A0MZ66 631 aa20.81■□□□□ 0.92
POLR2J3-205ENST00000489144 GSCP56915 257 aaPredicted RBP20.81■□□□□ 0.92
POLR2J3-205ENST00000489144 SSRP1Q08945 709 aaKnown RBP20.81■□□□□ 0.92
POLR2J3-205ENST00000489144 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 KRT85P78386 507 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 CPVLQ9H3G5 476 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 ECM29Q5VYK3 1845 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 CLRN2A0PK11 232 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 TROAPQ12815 778 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 DALRD3Q5D0E6 543 aaKnown RBP20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 RTKN2Q8IZC4 609 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 FBXO18Q8NFZ0 1043 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 NEK11Q8NG66 645 aa20.8■□□□□ 0.92
POLR2J3-205ENST00000489144 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 NBPF11Q86T75 865 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 ZSCAN29Q8IWY8 852 aaPredicted RBP20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 PRMT6Q96LA8 375 aaPredicted RBP20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 SPATA32Q96LK8 384 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 VEGFAP15692 232 aaPredicted RBP20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 RASSF7Q02833 373 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 CFAP100Q494V2 611 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 KRT40Q6A162 431 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 FBXO38Q6PIJ6 1188 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 C16orf86Q6ZW13 317 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 SUGT1Q9Y2Z0 365 aa20.79■□□□□ 0.92
POLR2J3-205ENST00000489144 GOLGA8HP0CJ92 632 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 HHIPL2Q6UWX4 724 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 SRLQ86TD4 932 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 STAG2Q8N3U4 1231 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 SUPT20HQ8NEM7 779 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 USP28Q96RU2 1077 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 DDTLA6NHG4 134 aaPredicted RBP20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 CDKL5O76039 1030 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms