RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 EHMT1Q9H9B1 1298 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 MKNK2Q9HBH9 465 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 ADAMTS6Q9UKP5 1117 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 U3KQE9 123 aa5.68□□□□□ -1.5
KDM3A-213ENST00000488971 ARID1BQ8NFD5 2236 aaPredicted RBP5.67□□□□□ -1.5
KDM3A-213ENST00000488971 hCG_2014768A0A024R1R8 64 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 BPNT1O95861 308 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 ARNTP27540 789 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 OXCT1P55809 520 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 ZNF252P-AS1Q0IIN9 211 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 SEPT6Q14141 434 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 SH3TC2Q8TF17 1288 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 TMEM40Q8WWA1 233 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 BRMS1Q9HCU9 246 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 NOP58Q9Y2X3 529 aaKnown RBP5.67□□□□□ -1.5
KDM3A-213ENST00000488971 PCDHGC5Q9Y5F6 944 aa5.67□□□□□ -1.5
KDM3A-213ENST00000488971 CCDC85CA6NKD9 419 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 PDPK1O15530 556 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 CDC45O75419 566 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 ATE1O95260 518 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 NEFMP07197 916 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 IBSPP21815 317 aaPredicted RBP5.66□□□□□ -1.5
KDM3A-213ENST00000488971 CHMP4BP1P59074 171 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 IGBP1P78318 339 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 RPL6Q02878 288 aaKnown RBP5.66□□□□□ -1.5
KDM3A-213ENST00000488971 CLCQ05315 142 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 MAP1SQ66K74 1059 aaPredicted RBP5.66□□□□□ -1.5
KDM3A-213ENST00000488971 GK5Q6ZS86 529 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 LSRQ86X29 649 aaPredicted RBP5.66□□□□□ -1.5
KDM3A-213ENST00000488971 LILRB2Q8N423 598 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 C19orf47Q8N9M1 422 aaKnown RBP5.66□□□□□ -1.5
KDM3A-213ENST00000488971 STK35Q8TDR2 534 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 ISL2Q96A47 359 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 ACSBG1Q96GR2 724 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 DNAJC7Q99615 494 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 CBX8Q9HC52 389 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 CACNA2D2Q9NY47 1150 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 PLAGL2Q9UPG8 496 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 MAPK8IP1Q9UQF2 711 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 PRKAB1Q9Y478 270 aa5.66□□□□□ -1.5
KDM3A-213ENST00000488971 TRIM37O94972 964 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 IFRD2Q12894 506 aaPredicted RBP5.65□□□□□ -1.5
KDM3A-213ENST00000488971 FXNQ16595 210 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 ARSHQ5FYA8 562 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 FBXW10Q5XX13 1052 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 SLC23A3Q6PIS1 610 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 KIAA0907Q7Z7F0 614 aaPredicted RBP5.65□□□□□ -1.5
KDM3A-213ENST00000488971 PDZD3Q86UT5 571 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 JMYQ8N9B5 988 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 RNF214Q8ND24 703 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 GRIN3AQ8TCU5 1115 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 APPBP2Q92624 585 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 TNKS2Q9H2K2 1166 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 KANSL2Q9H9L4 492 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 PICK1Q9NRD5 415 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 FANCLQ9NW38 375 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 TMEM260Q9NX78 707 aa5.65□□□□□ -1.5
KDM3A-213ENST00000488971 DNAJC6O75061 913 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 ERVK-24P63145 666 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 IKZF1Q13422 519 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 ZC3H12AQ5D1E8 599 aaKnown RBP5.64□□□□□ -1.51
KDM3A-213ENST00000488971 FILIP1Q7Z7B0 1213 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 HOMER1Q86YM7 354 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 PRDM7Q9NQW5 492 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 ST7Q9NRC1 585 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 IFT57Q9NWB7 429 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 GTF2IRD1Q9UHL9 959 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 POLR3KQ9Y2Y1 108 aaPredicted RBP5.64□□□□□ -1.51
KDM3A-213ENST00000488971 PCDHB14Q9Y5E9 798 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 COL4A3BPQ9Y5P4 624 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 SNX11Q9Y5W9 270 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 PRR36Q9H6K5 1346 aa5.64□□□□□ -1.51
KDM3A-213ENST00000488971 ESYT3A0FGR9 886 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 LRRC10BA6NIK2 292 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 MEIS3P2A8K0S8 358 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 RAB11FIP3O75154 756 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 PTPN11Q06124 597 aaPredicted RBP5.63□□□□□ -1.51
KDM3A-213ENST00000488971 GPBAR1Q8TDU6 330 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 MICAL1Q8TDZ2 1067 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 ASB11Q8WXH4 323 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 ZNF669Q96BR6 464 aaPredicted RBP5.63□□□□□ -1.51
KDM3A-213ENST00000488971 SLKQ9H2G2 1235 aaPredicted RBP5.63□□□□□ -1.51
KDM3A-213ENST00000488971 PCDH12Q9NPG4 1184 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 CSADQ9Y600 493 aa5.63□□□□□ -1.51
KDM3A-213ENST00000488971 PPP1R12AO14974 1030 aaPredicted RBP5.62□□□□□ -1.51
KDM3A-213ENST00000488971 GJB6O95452 261 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 ANAPC15P60006 121 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 ZP2Q05996 745 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 SQSTM1Q13501 440 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 KCNMB1Q16558 191 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 LRRFIP1Q32MZ4 808 aaKnown RBP5.62□□□□□ -1.51
KDM3A-213ENST00000488971 C2orf27AQ580R0 203 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 PPM1JQ5JR12 505 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 LARP1BQ659C4 914 aaKnown RBP5.62□□□□□ -1.51
KDM3A-213ENST00000488971 ZSWIM9Q86XI8 627 aa5.62□□□□□ -1.51
KDM3A-213ENST00000488971 ST13P5Q8NFI4 369 aaPredicted RBP5.62□□□□□ -1.51
KDM3A-213ENST00000488971 FAM84AQ96KN4 292 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms