RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, human

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-215	ENST00000488914	BRMS1	Q9HCU9	246 aa		7.81	□□□□□ -1.16
CTNNB1-215	ENST00000488914	GPATCH2	Q9NW75	528 aa		7.81	□□□□□ -1.16
CTNNB1-215	ENST00000488914	SLC22A31	A6NKX4	558 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	GREM1	O60565	184 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	HPX	P02790	462 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	KRT1	P04264	644 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	PKN1	Q16512	942 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	DIEXF	Q68CQ4	756 aa	Known RBP	7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	PHACTR4	Q8IZ21	702 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	MYLIP	Q8WY64	445 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	BCL2L13	Q9BXK5	485 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	NSUN3	Q9H649	340 aa	Known RBP	7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	C19orf44	Q9H6X5	657 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	EBF1	Q9UH73	591 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	KCNH3	Q9ULD8	1083 aa		7.8	□□□□□ -1.16
CTNNB1-215	ENST00000488914	UBOX5	O94941	541 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	ZGLP1	P0C6A0	271 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	EIF4A3	P38919	411 aa	Known RBP	7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	MRPL58	Q14197	206 aa	Known RBP	7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	TIGD5	Q53EQ6	642 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	ARSH	Q5FYA8	562 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	CCDC120	Q96HB5	630 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	KCNQ5	Q9NR82	932 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	ADAMTS1	Q9UHI8	967 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	PCDHB14	Q9Y5E9	798 aa		7.79	□□□□□ -1.16
CTNNB1-215	ENST00000488914	LTK	P29376	864 aa		7.78	□□□□□ -1.16
CTNNB1-215	ENST00000488914	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.78	□□□□□ -1.16
CTNNB1-215	ENST00000488914	RBM47	A0AV96	593 aa	Known RBP	7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	RGS13	O14921	159 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	RAC2	P15153	192 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	POLR2B	P30876	1174 aa	Known RBP	7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	GBP1	P32455	592 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	LDLRAD1	Q5T700	205 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	LRRC3	Q9BY71	257 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	RNF32	Q9H0A6	362 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	UBP1	Q9NZI7	540 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	GGT7	Q9UJ14	662 aa		7.77	□□□□□ -1.17
CTNNB1-215	ENST00000488914	C1QTNF9	P0C862	333 aa		7.76	□□□□□ -1.17
CTNNB1-215	ENST00000488914	CWF19L2	Q2TBE0	894 aa	Known RBP	7.76	□□□□□ -1.17
CTNNB1-215	ENST00000488914	SPOCD1	Q6ZMY3	1216 aa		7.76	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ASPN	Q9BXN1	380 aa		7.76	□□□□□ -1.17
CTNNB1-215	ENST00000488914	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.76	□□□□□ -1.17
CTNNB1-215	ENST00000488914	RAP1GAP	P47736	663 aa		7.75	□□□□□ -1.17
CTNNB1-215	ENST00000488914	TEK	Q02763	1124 aa		7.75	□□□□□ -1.17
CTNNB1-215	ENST00000488914	CLC	Q05315	142 aa		7.75	□□□□□ -1.17
CTNNB1-215	ENST00000488914	SEZ6	Q53EL9	994 aa		7.75	□□□□□ -1.17
CTNNB1-215	ENST00000488914	LCE1D	Q5T752	114 aa		7.75	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ANTXR1	Q9H6X2	564 aa		7.75	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ATE1	O95260	518 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	TSPAN15	O95858	294 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	RAG1	P15918	1043 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	CFP	P27918	469 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	GALK1	P51570	392 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	SNW1	Q13573	536 aa	Known RBP	7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	LCE4A	Q5TA78	99 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	OVOS1	Q6IE37	1185 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	PDZD8	Q8NEN9	1154 aa		7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.74	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ROBO2	Q9HCK4	1378 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	EFEMP2	O95967	443 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	CLEC16A	Q2KHT3	1053 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ZNF326	Q5BKZ1	582 aa	Known RBP	7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	GK5	Q6ZS86	529 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	TMC3	Q7Z5M5	1100 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	C1QL4	Q86Z23	238 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	USHBP1	Q8N6Y0	703 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ATG4C	Q96DT6	458 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	EHMT1	Q9H9B1	1298 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	GMIP	Q9P107	970 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	MINPP1	Q9UNW1	487 aa		7.73	□□□□□ -1.17
CTNNB1-215	ENST00000488914	NMI	Q13287	307 aa	Predicted RBP	7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	HS2ST1	Q7LGA3	356 aa		7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	G6PC3	Q9BUM1	346 aa		7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	HDAC8	Q9BY41	377 aa		7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	EPB41L4B	Q9H329	900 aa		7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	CNNM2	Q9H8M5	875 aa		7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	ZNF281	Q9Y2X9	895 aa		7.72	□□□□□ -1.17
CTNNB1-215	ENST00000488914	NOTO	A8MTQ0	251 aa		7.71	□□□□□ -1.18
CTNNB1-215	ENST00000488914	CDCP2	Q5VXM1	449 aa		7.71	□□□□□ -1.18
CTNNB1-215	ENST00000488914	LINC01599	Q8WXQ3	324 aa		7.71	□□□□□ -1.18
CTNNB1-215	ENST00000488914	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	PSPN	O60542	156 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	MCM4	P33991	863 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	ITGAE	P38570	1179 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	MLEC	Q14165	292 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	NBPF9	Q3BBW0	867 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	LCNL1	Q6ZST4	164 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	OXR1	Q8N573	874 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	SHISA4	Q96DD7	197 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	TCTN2	Q96GX1	697 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	EAF1	Q96JC9	268 aa	Predicted RBP	7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	PPP1R16B	Q96T49	567 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	FOXP3	Q9BZS1	431 aa		7.7	□□□□□ -1.18
CTNNB1-215	ENST00000488914	FITM1	A5D6W6	292 aa		7.69	□□□□□ -1.18
CTNNB1-215	ENST00000488914	ETV2	O00321	342 aa	Predicted RBP	7.69	□□□□□ -1.18

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