RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 FGD4Q96M96 766 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 SLC26A8Q96RN1 970 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 CDC6Q99741 560 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 GBP3Q9H0R5 595 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 SUGT1Q9Y2Z0 365 aa6.75□□□□□ -1.33
SRRM1-215ENST00000488317 DNAJC6O75061 913 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 RNF4P78317 190 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 MAP7Q14244 749 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 DCAF15Q66K64 600 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 JMYQ8N9B5 988 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 LRRN4CLQ8ND94 238 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 ZCRB1Q8TBF4 217 aaKnown RBP6.74□□□□□ -1.33
SRRM1-215ENST00000488317 PPP1R13LQ8WUF5 828 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 WFDC12Q8WWY7 111 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 SGSM3Q96HU1 749 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 KREMEN1Q96MU8 473 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 FEZ1Q99689 392 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 SEMA6CQ9H3T2 930 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 SPC25Q9HBM1 224 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 IFT57Q9NWB7 429 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 FBXL21Q9UKT6 434 aa6.74□□□□□ -1.33
SRRM1-215ENST00000488317 hCG_2014768A0A024R1R8 64 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 NOP56O00567 594 aaKnown RBP6.73□□□□□ -1.33
SRRM1-215ENST00000488317 NOS3P29474 1203 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 ETV3P41162 512 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 HSP90AA2PQ14568 343 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-215ENST00000488317 C21orf62-AS1Q17RA5 79 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 TKFCQ3LXA3 575 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 SGO2Q562F6 1265 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 TMEM67Q5HYA8 995 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 NBPF12Q5TAG4 269 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-215ENST00000488317 KIAA0907Q7Z7F0 614 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-215ENST00000488317 RIN3Q8TB24 985 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 UTP4Q969X6 686 aaKnown RBP6.73□□□□□ -1.33
SRRM1-215ENST00000488317 UBL7Q96S82 380 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-215ENST00000488317 KCNF1Q9H3M0 494 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 PRKAB1Q9Y478 270 aa6.73□□□□□ -1.33
SRRM1-215ENST00000488317 TRAV20A0A0B4J274 112 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 A0A1W2PQU0 124 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 ADCY3O60266 1144 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 PPM1BO75688 479 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 BMP3P12645 472 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 IGBP1P78318 339 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 NFKBIBQ15653 356 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 LONRF2Q1L5Z9 754 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 ZC3H12BQ5HYM0 836 aaKnown RBP6.72□□□□□ -1.33
SRRM1-215ENST00000488317 C7orf61Q8IZ16 206 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 SYNPOQ8N3V7 929 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 DNAJB8Q8NHS0 232 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 GPATCH3Q96I76 525 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
SRRM1-215ENST00000488317 KLHL25Q9H0H3 589 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 PRDM10Q9NQV6 1147 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 TPX2Q9ULW0 747 aaKnown RBP6.72□□□□□ -1.33
SRRM1-215ENST00000488317 ADAMTS8Q9UP79 889 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 ZNF451Q9Y4E5 1061 aa6.72□□□□□ -1.33
SRRM1-215ENST00000488317 FAM95CA0A1B0GW59 222 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 CBFA2T2O43439 604 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 SLITRK5O94991 958 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 ITGAVP06756 1048 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 CD247P20963 164 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 MAP4P27816 1152 aaKnown RBP6.71□□□□□ -1.34
SRRM1-215ENST00000488317 L1CAMP32004 1257 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 ANAPC15P60006 121 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 CDK5R2Q13319 367 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 AUHQ13825 339 aaKnown RBP6.71□□□□□ -1.34
SRRM1-215ENST00000488317 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 NOL9Q5SY16 702 aaKnown RBP6.71□□□□□ -1.34
SRRM1-215ENST00000488317 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
SRRM1-215ENST00000488317 Q6ZS46 218 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.71□□□□□ -1.34
SRRM1-215ENST00000488317 TOP6BLQ8N6T0 577 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 ADCY4Q8NFM4 1077 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 SCARF2Q96GP6 870 aaPredicted RBP6.71□□□□□ -1.34
SRRM1-215ENST00000488317 AARSD1Q9BTE6 412 aaKnown RBP6.71□□□□□ -1.34
SRRM1-215ENST00000488317 APEX2Q9UBZ4 518 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 PCDHB12Q9Y5F1 795 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 CD2APQ9Y5K6 639 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 COL4A3BPQ9Y5P4 624 aa6.71□□□□□ -1.34
SRRM1-215ENST00000488317 CCDC163A0A0D9SF12 145 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 KRBA1A5PL33 1030 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 DYNC1LI2O43237 492 aaPredicted RBP6.7□□□□□ -1.34
SRRM1-215ENST00000488317 ITGA4P13612 1032 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 CYP7A1P22680 504 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 PPP2R2AP63151 447 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 UVSSAQ2YD98 709 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 PAOXQ6QHF9 649 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 BVESQ8NE79 360 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 GIMAP7Q8NHV1 300 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 EZH1Q92800 747 aaPredicted RBP6.7□□□□□ -1.34
SRRM1-215ENST00000488317 LGR4Q9BXB1 951 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 ASPNQ9BXN1 380 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 TMX1Q9H3N1 280 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 WHRNQ9P202 907 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 AKT3Q9Y243 479 aa6.7□□□□□ -1.34
SRRM1-215ENST00000488317 TRBV23-1A0A0A0MS06 115 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 WIPF1O43516 503 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 COL8A1P27658 744 aa6.69□□□□□ -1.34
SRRM1-215ENST00000488317 MBTPS1Q14703 1052 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms