RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 ATF3P18847 181 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
TMF1-203ENST00000488010 CTSWP56202 376 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 PDE4CQ08493 712 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 RASSF8Q8NHQ8 419 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 FAM71BQ8TC56 605 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 SDR42E1Q8WUS8 393 aa11.31□□□□□ -0.6
TMF1-203ENST00000488010 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMF1-203ENST00000488010 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 TJP1Q07157 1748 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 RASGRF1Q13972 1273 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 IPO4Q8TEX9 1081 aaKnown RBP11.3□□□□□ -0.6
TMF1-203ENST00000488010 NELFBQ8WX92 580 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 PCDH11XQ9BZA7 1347 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 PCDH11YQ9BZA8 1340 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 ABCC12Q96J65 1359 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 GSDMAQ96QA5 445 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 CAMTA1Q9Y6Y1 1673 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 TNKSO95271 1327 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 MCM7P33993 719 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 PTGDRQ13258 359 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 CCDC122Q5T0U0 273 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 GDAQ9Y2T3 454 aa11.3□□□□□ -0.6
TMF1-203ENST00000488010 EPN1Q9Y6I3 576 aaPredicted RBP11.3□□□□□ -0.6
TMF1-203ENST00000488010 PAK1Q13153 545 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
TMF1-203ENST00000488010 LRRC31Q6UY01 552 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 PRDM11Q9NQV5 511 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 NDUFA10O95299 355 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 ATP1A1P05023 1023 aaKnown RBP11.29□□□□□ -0.6
TMF1-203ENST00000488010 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
TMF1-203ENST00000488010 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 NLRP10Q86W26 655 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 AFAP1L1Q8TED9 768 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 PCMTD1Q96MG8 357 aaPredicted RBP11.29□□□□□ -0.6
TMF1-203ENST00000488010 PLIN2Q99541 437 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 BRMS1Q9HCU9 246 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 TMOD3Q9NYL9 352 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 ASAP1Q9ULH1 1129 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 XDHP47989 1333 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
TMF1-203ENST00000488010 CYP2D7A0A087X1C5 515 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 EIF3CLB5ME19 914 aaKnown RBP11.28□□□□□ -0.6
TMF1-203ENST00000488010 CTR9Q6PD62 1173 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 SMARCC1Q92922 1105 aaPredicted RBP11.28□□□□□ -0.6
TMF1-203ENST00000488010 EIF3CQ99613 913 aaKnown RBP11.28□□□□□ -0.6
TMF1-203ENST00000488010 A0A0G2JS52 829 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 BCAMP50895 628 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 MRPS25P82663 173 aaKnown RBP11.28□□□□□ -0.6
TMF1-203ENST00000488010 PPARAQ07869 468 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 ALX1Q15699 326 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 TCP11X2Q5H9J9 407 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 PIK3AP1Q6ZUJ8 805 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 VGLL2Q8N8G2 317 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 IQUBQ8NA54 791 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 LPIN2Q92539 896 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
TMF1-203ENST00000488010 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
TMF1-203ENST00000488010 TTC26A0AVF1 554 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 SLC5A1P13866 664 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 TTC31Q49AM3 519 aaPredicted RBP11.28□□□□□ -0.6
TMF1-203ENST00000488010 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 CRACR2AQ9BSW2 395 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 LMTK3Q96Q04 1460 aa11.28□□□□□ -0.6
TMF1-203ENST00000488010 MACROD2A1Z1Q3 448 aa11.27□□□□□ -0.6
TMF1-203ENST00000488010 ARID4AP29374 1257 aaPredicted RBP11.27□□□□□ -0.6
TMF1-203ENST00000488010 SH3RF1Q7Z6J0 888 aa11.27□□□□□ -0.6
TMF1-203ENST00000488010 TMTC2Q8N394 836 aa11.27□□□□□ -0.6
TMF1-203ENST00000488010 FERMT2Q96AC1 680 aa11.27□□□□□ -0.6
TMF1-203ENST00000488010 DRC1Q96MC2 740 aa11.27□□□□□ -0.6
TMF1-203ENST00000488010 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.6
TMF1-203ENST00000488010 REXO2Q9Y3B8 237 aaKnown RBP11.27□□□□□ -0.6
TMF1-203ENST00000488010 SAR1BQ9Y6B6 198 aa11.27□□□□□ -0.6
TMF1-203ENST00000488010 MYH8P13535 1937 aa11.27□□□□□ -0.6
TMF1-203ENST00000488010 ATRNO75882 1429 aa11.27□□□□□ -0.61
TMF1-203ENST00000488010 ZNF185O15231 689 aa11.27□□□□□ -0.61
TMF1-203ENST00000488010 CYP7A1P22680 504 aa11.27□□□□□ -0.61
TMF1-203ENST00000488010 TUBB4BP68371 445 aa11.27□□□□□ -0.61
TMF1-203ENST00000488010 AMPD2Q01433 879 aa11.27□□□□□ -0.61
TMF1-203ENST00000488010 FKBP15Q5T1M5 1219 aa11.27□□□□□ -0.61
TMF1-203ENST00000488010 IFIT1BQ5T764 474 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms