RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 HSPA6P17066 643 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 GJA5P36382 358 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 LIFRP42702 1097 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 GTF2A2P52657 109 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 BACE1P56817 501 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 RCSD1Q6JBY9 416 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 PNMA1Q8ND90 353 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 MKL1Q969V6 931 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 KIF2CQ99661 725 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 LY9Q9HBG7 655 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
NUP188-207ENST00000487952 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
NUP188-207ENST00000487952 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 KCNH4Q9UQ05 1017 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 MTMR7Q9Y216 660 aa16.47■□□□□ 0.23
NUP188-207ENST00000487952 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
NUP188-207ENST00000487952 ST18O60284 1047 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 NOVP48745 357 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 HMGCS2P54868 508 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 ANKRD1Q15327 319 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 CYP4F22Q6NT55 531 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 GADL1Q6ZQY3 521 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 CATIPQ7Z7H3 387 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 BRF1Q92994 677 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
NUP188-207ENST00000487952 GPHNQ9NQX3 736 aaPredicted RBP16.46■□□□□ 0.23
NUP188-207ENST00000487952 MANSC4A6NHS7 340 aaPredicted RBP16.45■□□□□ 0.22
NUP188-207ENST00000487952 CETPP11597 493 aa16.45■□□□□ 0.22
NUP188-207ENST00000487952 SLFN13Q68D06 897 aa16.45■□□□□ 0.22
NUP188-207ENST00000487952 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
NUP188-207ENST00000487952 SLC12A7Q9Y666 1083 aa16.45■□□□□ 0.22
NUP188-207ENST00000487952 A0A0G2JLL6 359 aaPredicted RBP16.44■□□□□ 0.22
NUP188-207ENST00000487952 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 F5H6K3 240 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 NDUFB10O96000 172 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 HTRA3P83110 453 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 KLRC3Q07444 240 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 NOGQ13253 232 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 CCDC96Q2M329 555 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 PRRT2Q7Z6L0 340 aaPredicted RBP16.44■□□□□ 0.22
NUP188-207ENST00000487952 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 ZNF654Q8IZM8 581 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 FBXL16Q8N461 479 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 NUP133Q8WUM0 1156 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 LPAR1Q92633 364 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 SENP2Q9HC62 589 aa16.44■□□□□ 0.22
NUP188-207ENST00000487952 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 DDAH1O94760 285 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 CALM1P0DP23 149 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 CALM2P0DP24 149 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 CALM3P0DP25 149 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 SLC1A4P43007 532 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 AK2P54819 239 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 CCL15Q16663 113 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
NUP188-207ENST00000487952 SPICE1Q8N0Z3 855 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
NUP188-207ENST00000487952 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 C12orf42Q96LP6 360 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 AGXT2Q9BYV1 514 aa16.43■□□□□ 0.22
NUP188-207ENST00000487952 ALDH8A1Q9H2A2 487 aaPredicted RBP16.43■□□□□ 0.22
NUP188-207ENST00000487952 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
NUP188-207ENST00000487952 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
NUP188-207ENST00000487952 WDR46O15213 610 aaKnown RBP16.42■□□□□ 0.22
NUP188-207ENST00000487952 ZBTB43O43298 467 aa16.42■□□□□ 0.22
NUP188-207ENST00000487952 SREBF2Q12772 1141 aa16.42■□□□□ 0.22
NUP188-207ENST00000487952 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUP188-207ENST00000487952 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
NUP188-207ENST00000487952 APOA5Q6Q788 366 aa16.42■□□□□ 0.22
NUP188-207ENST00000487952 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
NUP188-207ENST00000487952 CTCFLQ8NI51 663 aaPredicted RBP16.42■□□□□ 0.22
NUP188-207ENST00000487952 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
NUP188-207ENST00000487952 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 PARP1P09874 1014 aaKnown RBP16.41■□□□□ 0.22
NUP188-207ENST00000487952 BMP3P12645 472 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 VCAM1P19320 739 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 INHBEP58166 350 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
NUP188-207ENST00000487952 DGKZQ13574 1117 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 MS4A4AQ96JQ5 239 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
NUP188-207ENST00000487952 MYL10Q9BUA6 226 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 TANGO6Q9C0B7 1094 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 RPAP3Q9H6T3 665 aaPredicted RBP16.41■□□□□ 0.22
NUP188-207ENST00000487952 AGTPBP1Q9UPW5 1226 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
NUP188-207ENST00000487952 MYH4Q9Y623 1939 aa16.41■□□□□ 0.22
NUP188-207ENST00000487952 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
NUP188-207ENST00000487952 PDHBP11177 359 aa16.4■□□□□ 0.22
NUP188-207ENST00000487952 KIF5BP33176 963 aa16.4■□□□□ 0.22
NUP188-207ENST00000487952 MCM2P49736 904 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms