RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 PDE1AP54750 535 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 ERVK-9P63128 1117 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 ERVK-24P63145 666 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 DIS3LQ8TF46 1054 aaKnown RBP12.16□□□□□ -0.46
LBR-207ENST00000487054 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 C12orf42Q96LP6 360 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 LNPKQ9C0E8 428 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 PARP14Q460N5 1801 aa12.16□□□□□ -0.46
LBR-207ENST00000487054 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 MPHOSPH10O00566 681 aaKnown RBP12.15□□□□□ -0.46
LBR-207ENST00000487054 ZFYP08048 801 aaPredicted RBP12.15□□□□□ -0.46
LBR-207ENST00000487054 CCL14Q16627 93 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 LHX8Q68G74 356 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 KBTBD3Q8NAB2 608 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 DPF3Q92784 378 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 KIAA1683Q9H0B3 1180 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.46
LBR-207ENST00000487054 PPP4R2Q9NY27 417 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.46
LBR-207ENST00000487054 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
LBR-207ENST00000487054 TFRCP02786 760 aaKnown RBP12.14□□□□□ -0.47
LBR-207ENST00000487054 HMGCRP04035 888 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 AKR1B1P15121 316 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 CATSPERGQ6ZRH7 1159 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 GPR142Q7Z601 462 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 USP6NLQ92738 828 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
LBR-207ENST00000487054 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
LBR-207ENST00000487054 CABP5Q9NP86 173 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 BTBD7Q9P203 1132 aa12.14□□□□□ -0.47
LBR-207ENST00000487054 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
LBR-207ENST00000487054 PAWRQ96IZ0 340 aaKnown RBP12.13□□□□□ -0.47
LBR-207ENST00000487054 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
LBR-207ENST00000487054 COL11A1P12107 1806 aaPredicted RBP12.13□□□□□ -0.47
LBR-207ENST00000487054 GREB1LQ9C091 1923 aaPredicted RBP12.12□□□□□ -0.47
LBR-207ENST00000487054 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
LBR-207ENST00000487054 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 USP17L21D6R901 530 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.47
LBR-207ENST00000487054 USP14P54578 494 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 MORN1Q5T089 497 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 MAP3K21Q5TCX8 1036 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 PLEKHH3Q7Z736 793 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
LBR-207ENST00000487054 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 FLRT1Q9NZU1 646 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
LBR-207ENST00000487054 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 DNAH12Q6ZR08 3092 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 CCND3P30281 292 aaPredicted RBP12.11□□□□□ -0.47
LBR-207ENST00000487054 MAPK4P31152 587 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 CDK8P49336 464 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 CACNB2Q08289 660 aaPredicted RBP12.11□□□□□ -0.47
LBR-207ENST00000487054 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
LBR-207ENST00000487054 RABGAP1Q9Y3P9 1069 aa12.11□□□□□ -0.47
LBR-207ENST00000487054 HIP1O00291 1037 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 ZKSCAN1P17029 563 aaPredicted RBP12.1□□□□□ -0.47
LBR-207ENST00000487054 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
LBR-207ENST00000487054 APPBP2Q92624 585 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 OSBP2Q969R2 916 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 HTATIP2Q9BUP3 242 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
LBR-207ENST00000487054 SWAP70Q9UH65 585 aa12.1□□□□□ -0.47
LBR-207ENST00000487054 M0R2C6 588 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
LBR-207ENST00000487054 XRCC5P13010 732 aaKnown RBP12.09□□□□□ -0.47
LBR-207ENST00000487054 GNAT2P19087 354 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 RGS2P41220 211 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 ICA1Q05084 483 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 C16orf86Q6ZW13 317 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms