RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 EEPD1Q7L9B9 569 aa5.7□□□□□ -1.5
PTCD3-216ENST00000487043 ST13P5Q8NFI4 369 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-216ENST00000487043 GIMAP7Q8NHV1 300 aa5.7□□□□□ -1.5
PTCD3-216ENST00000487043 THAP3Q8WTV1 239 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-216ENST00000487043 ACSF2Q96CM8 615 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-216ENST00000487043 WNT10AQ9GZT5 417 aa5.7□□□□□ -1.5
PTCD3-216ENST00000487043 CNNM2Q9H8M5 875 aa5.7□□□□□ -1.5
PTCD3-216ENST00000487043 TMEM260Q9NX78 707 aa5.7□□□□□ -1.5
PTCD3-216ENST00000487043 ZMYM5Q9UJ78 669 aa5.7□□□□□ -1.5
PTCD3-216ENST00000487043 ADAM30Q9UKF2 790 aa5.7□□□□□ -1.5
PTCD3-216ENST00000487043 TNFRSF10CO14798 259 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 PPP1R12AO14974 1030 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-216ENST00000487043 DNAJC6O75061 913 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 RXRBP28702 533 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 POLR2BP30876 1174 aaKnown RBP5.69□□□□□ -1.5
PTCD3-216ENST00000487043 ID3Q02535 119 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 NCAPHQ15003 741 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 AKAP4Q5JQC9 854 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 EXOSC6Q5RKV6 272 aaKnown RBP5.69□□□□□ -1.5
PTCD3-216ENST00000487043 CDCP2Q5VXM1 449 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 FAM13CQ8NE31 585 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 ZCRB1Q8TBF4 217 aaKnown RBP5.69□□□□□ -1.5
PTCD3-216ENST00000487043 MFSD14AQ96MC6 490 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 PHAXQ9H814 394 aaKnown RBP5.69□□□□□ -1.5
PTCD3-216ENST00000487043 ATG3Q9NT62 314 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 PPP1R9AQ9ULJ8 1098 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 PCDHGC5Q9Y5F6 944 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 PTCH2Q9Y6C5 1203 aa5.69□□□□□ -1.5
PTCD3-216ENST00000487043 GYS2P54840 703 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 ERVK-24P63145 666 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 SLC7A5Q01650 507 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 RING1Q06587 406 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 GNPTABQ3T906 1256 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 C16orf86Q6ZW13 317 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 PHACTR4Q8IZ21 702 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 FBXL6Q8N531 539 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 SPC25Q9HBM1 224 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 FAM86C1Q9NVL1 165 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 PIM2Q9P1W9 311 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 TJP2Q9UDY2 1190 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 ANGEL1Q9UNK9 670 aaKnown RBP5.68□□□□□ -1.5
PTCD3-216ENST00000487043 COL4A3BPQ9Y5P4 624 aa5.68□□□□□ -1.5
PTCD3-216ENST00000487043 TMPRSS2O15393 492 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 SUSD5O60279 629 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 ASMTLO95671 621 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 MAP4P27816 1152 aaKnown RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 YARSP54577 528 aaKnown RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 ANAPC15P60006 121 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 TKFCQ3LXA3 575 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 ZBTB37Q5TC79 503 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 KIAA0907Q7Z7F0 614 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 MCATQ8IVS2 390 aaKnown RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 C12orf50Q8NA57 414 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 TMEM87BQ96K49 555 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 KIF2CQ99661 725 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 DPH2Q9BQC3 489 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 CWC22Q9HCG8 908 aaKnown RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 CRIM1Q9NZV1 1036 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 AP4E1Q9UPM8 1137 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 NOP58Q9Y2X3 529 aaKnown RBP5.67□□□□□ -1.5
PTCD3-216ENST00000487043 PRKAB1Q9Y478 270 aa5.67□□□□□ -1.5
PTCD3-216ENST00000487043 FANCGO15287 622 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 FAM153BP0C7A2 387 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 HOXA10P31260 410 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-216ENST00000487043 C21orf62-AS1Q17RA5 79 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 TAF7LQ5H9L4 462 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 NUTM2GQ5VZR2 741 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 HID1Q8IV36 788 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 JMYQ8N9B5 988 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 ZNF507Q8TCN5 953 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 KLHL6Q8WZ60 621 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 ZNF669Q96BR6 464 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-216ENST00000487043 FANCD2OSQ96PS1 177 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 FEZ1Q99689 392 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 OSBPL1AQ9BXW6 950 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 FBRSQ9HAH7 460 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 ADGRE2Q9UHX3 823 aa5.66□□□□□ -1.5
PTCD3-216ENST00000487043 ZNF214Q9UL59 606 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-216ENST00000487043 TP53P04637 393 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-216ENST00000487043 HCLS1P14317 486 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-216ENST00000487043 GBP1P32455 592 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 FZD5Q13467 585 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 TTLL4Q14679 1199 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 TCEA2Q15560 299 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 NKG7Q16617 165 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 SLC10A6Q3KNW5 377 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 SV2CQ496J9 727 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 SGO2Q562F6 1265 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 TDRD10Q5VZ19 366 aaKnown RBP5.65□□□□□ -1.5
PTCD3-216ENST00000487043 SLC6A19Q695T7 634 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 CDC37L1Q7L3B6 337 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 TMEM192Q8IY95 271 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 ABI1Q8IZP0 508 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 RNF214Q8ND24 703 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 SLC6A18Q96N87 628 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 TMPRSS13Q9BYE2 586 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 ATXN3LQ9H3M9 355 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 PCDH12Q9NPG4 1184 aa5.65□□□□□ -1.5
PTCD3-216ENST00000487043 DISC1Q9NRI5 854 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms