RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-227ENST00000486806 MAP3K14Q99558 947 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
MCF2L-227ENST00000486806 MYL10Q9BUA6 226 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 KIAA1683Q9H0B3 1180 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 SH2D4AQ9H788 454 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 AS3MTQ9HBK9 375 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 LIMCH1Q9UPQ0 1083 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 AFG3L2Q9Y4W6 797 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 SLC12A7Q9Y666 1083 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 TLL2Q9Y6L7 1015 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 ZHX2Q9Y6X8 837 aa11.21□□□□□ -0.61
MCF2L-227ENST00000486806 K7ELQ4 463 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-227ENST00000486806 ZBTB43O43298 467 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 PFKFB2O60825 505 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 NDUFB10O96000 172 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 PDHBP11177 359 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 GJA5P36382 358 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 ATP2B2Q01814 1243 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 PPIL2Q13356 520 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 MTMR2Q13614 643 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 MICU3Q86XE3 530 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 TMX3Q96JJ7 454 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 C12orf42Q96LP6 360 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 VCPKMTQ9H867 229 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 SH2B1Q9NRF2 756 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-227ENST00000486806 KCNH4Q9UQ05 1017 aa11.2□□□□□ -0.62
MCF2L-227ENST00000486806 TRIM75PA6NK02 468 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 USP17L10C9JJH3 530 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 F5H6K3 240 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 IRF6O14896 467 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 CALM1P0DP23 149 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 CALM2P0DP24 149 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 CALM3P0DP25 149 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 RXRAP19793 462 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 METAP2P50579 478 aaKnown RBP eCLIP11.19□□□□□ -0.62
MCF2L-227ENST00000486806 BACE1P56817 501 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 HUNKP57058 714 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 KLRC3Q07444 240 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 SCRN1Q12765 414 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 SPP2Q13103 211 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 GRM4Q14833 912 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 HSCBQ8IWL3 235 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 DCAF4Q8WV16 495 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 GTF3C6Q969F1 213 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 OTUD5Q96G74 571 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 GMCL1Q96IK5 515 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-227ENST00000486806 FEZ1Q99689 392 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
MCF2L-227ENST00000486806 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-227ENST00000486806 A0A0G2JLL6 359 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-227ENST00000486806 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-227ENST00000486806 GOLGA8AA7E2F4 631 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 CXCL11O14625 94 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 ZBTB48P10074 688 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-227ENST00000486806 CDC27P30260 824 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
MCF2L-227ENST00000486806 USP14P54578 494 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 ZNF543Q08ER8 600 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 DGKZQ13574 1117 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 CUL4AQ13619 759 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 SLFN13Q68D06 897 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 SYNE3Q6ZMZ3 975 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 PRRT2Q7Z6L0 340 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-227ENST00000486806 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 LPAR1Q92633 364 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 WNK4Q96J92 1243 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 MAD2L2Q9UI95 211 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
MCF2L-227ENST00000486806 C19orf81C9J6K1 198 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 WDR46O15213 610 aaKnown RBP11.17□□□□□ -0.62
MCF2L-227ENST00000486806 SLC10A3P09131 477 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 VCAM1P19320 739 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 APLP1P51693 650 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 HMGCS2P54868 508 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 STK3Q13188 491 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 MOGSQ13724 837 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 PPP2R5BQ15173 497 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 ZYXQ15942 572 aaKnown RBP11.17□□□□□ -0.62
MCF2L-227ENST00000486806 RTN1Q16799 776 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 ASPRV1Q53RT3 343 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 RGMBQ6NW40 437 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 TMTC3Q6ZXV5 915 aa11.17□□□□□ -0.62
MCF2L-227ENST00000486806 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms